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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0052152 through 18771 annotations produced 1 hits



(CG32152):

Annotation Number : CG32152
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052152
Gbrowse : chr3L:16135301-16136885 (-) // 100.0 //
Probeset : 1633774_at
Accessions : protein= NP_730116;, nucleotide= NM_168653;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation
Interpro : 0008168 // methyltransferase activity // inferred from electronic annotation /// 0008276 // protein methyltransferase ac
FlyMine data for FBgn0052152.
VDRC has 3 RNAi stocks for FBgn0052152 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 0.70None
Head2 00 of 4 0.90None
Eye0 00 of 4 0.29None
Thoracicoabdominal ganglion1 00 of 4 0.50None
Salivary gland6 30 of 4 2.48None
Crop1 00 of 4 0.70None
Midgut3 20 of 4 1.20None
Tubule3 00 of 4 1.30None
Hindgut1 00 of 4 0.40None
Heart1 00 of 4 0.73None
Fat body1 00 of 4 0.56None
Ovary6 01 of 4 2.50Up
Testis7 14 of 4 2.80Up
Male accessory glands1 00 of 4 0.60None
Virgin spermatheca4 20 of 4 1.90None
Mated spermatheca2 00 of 4 0.89None
Adult carcass1 00 of 4 0.60None
Larval CNS1 00 of 4 0.60None
Larval Salivary gland2 10 of 4 0.81None
Larval midgut1 00 of 4 0.44None
Larval tubule1 00 of 4 0.60None
Larval hindgut3 00 of 4 1.33None
Larval fat body7 11 of 4 2.80None
Larval trachea1 00 of 4 0.47None
Larval carcass1 00 of 4 0.62None
S2 cells (growing)3 10 of 4 1.34None
Whole fly2 10 of 4

Looking for FBgn0052152. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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