FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0052174 through 18771 annotations produced 3 hits

/// /// UDP-sugar transporter in 74C (CG32174 /// CG33052 /// frc):

Annotation Number : CG33052
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0042641 /// FBgn0052174 /// FBgn0053052
Gbrowse : chr3L:17420405-17421931 (-) // 100.0 //
Probeset : 1636541_at
Accessions : protein= NP_001137962; /// NP_524126; /// NP_648977; /// NP_730270; /// NP_788523;, nucleotide= NM_001144490; /// NM_079402; /// NM_140720; /// NM_168732; /// NM_176345;
Pathway : 0000139 // Golgi membrane // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from sequence
Interpro : 0005457 // GDP-fucose transmembrane transporter activity // inferred from direct assay /// 0005458 // GDP-mannose transm
FlyMine data for FBgn0042641 /// FBgn0052174 /// FBgn0053052.
BioGrid reports that CG33052 interacts with CG7583 CG9573 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	104 ± 5	4 of 4	0.70	Down
Head	79 ± 3	4 of 4	0.50	Down
Eye	41 ± 2	4 of 4	0.27	Down
Thoracicoabdominal ganglion	88 ± 6	4 of 4	0.60	Down
Salivary gland	120 ± 17	4 of 4	0.79	None
Crop	115 ± 3	4 of 4	0.80	Down
Midgut	85 ± 6	4 of 4	0.60	Down
Tubule	51 ± 5	4 of 4	0.30	Down
Hindgut	78 ± 2	4 of 4	0.50	Down
Heart	92 ± 6	4 of 4	0.60	Down
Fat body	88 ± 10	4 of 4	0.58	Down
Ovary	312 ± 5	4 of 4	2.00	Up
Testis	11 ± 2	2 of 4	0.10	Down
Male accessory glands	518 ± 10	4 of 4	3.40	Up
Virgin spermatheca	121 ± 8	4 of 4	0.80	None
Mated spermatheca	157 ± 7	4 of 4	1.03	None
Adult carcass	85 ± 7	4 of 4	0.60	Down
Larval CNS	121 ± 8	4 of 4	0.79	None
Larval Salivary gland	221 ± 7	4 of 4	1.45	Up
Larval midgut	67 ± 0	4 of 4	0.44	Down
Larval tubule	58 ± 6	4 of 4	0.40	Down
Larval hindgut	79 ± 4	4 of 4	0.52	Down
Larval fat body	122 ± 12	4 of 4	0.80	None
Larval trachea	114 ± 10	4 of 4	0.75	Down
Larval carcass	96 ± 5	4 of 4	0.63	Down
S2 cells (growing)	328 ± 4	4 of 4	2.15	Up
Whole fly	153 ± 10	4 of 4

/// UDP-sugar transporter in 74C (CG32174 /// frc):

Annotation Number : CG3874
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0042641 /// FBgn0052174
Gbrowse : chr3L:17424680-17426288 (-) // 100.0 //
Probeset : 1626038_at
Accessions : protein= NP_001137962; /// NP_524126; /// NP_648977; /// NP_730270;, nucleotide= NM_001144490; /// NM_079402; /// NM_140720; /// NM_168732;
Pathway : 0000139 // Golgi membrane // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from sequence
Interpro : 0005457 // GDP-fucose transmembrane transporter activity // inferred from direct assay /// 0005458 // GDP-mannose transm
FlyMine data for FBgn0042641 /// FBgn0052174.
Homophila reports that CG3874 is a close match (7e-96) to human gene (NP_055954), a gene associated with .
BioGrid reports that CG3874 interacts with CG5338 CG9090 CG9375 CG18085 CG3936 CG3936 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	244 ± 3	4 of 4	0.80	Down
Head	264 ± 13	4 of 4	0.80	Down
Eye	181 ± 9	4 of 4	0.58	Down
Thoracicoabdominal ganglion	242 ± 7	4 of 4	0.80	Down
Salivary gland	571 ± 28	4 of 4	1.83	Up
Crop	305 ± 11	4 of 4	1.00	None
Midgut	522 ± 24	4 of 4	1.70	Up
Tubule	2401 ± 186	4 of 4	7.70	Up
Hindgut	313 ± 16	4 of 4	1.00	None
Heart	252 ± 6	4 of 4	0.81	Down
Fat body	375 ± 26	4 of 4	1.20	Up
Ovary	425 ± 11	4 of 4	1.40	Up
Testis	82 ± 4	4 of 4	0.30	Down
Male accessory glands	118 ± 5	4 of 4	0.40	Down
Virgin spermatheca	457 ± 12	4 of 4	1.47	Up
Mated spermatheca	516 ± 25	4 of 4	1.65	Up
Adult carcass	278 ± 6	4 of 4	0.90	Down
Larval CNS	237 ± 9	4 of 4	0.76	Down
Larval Salivary gland	162 ± 6	4 of 4	0.52	Down
Larval midgut	470 ± 26	4 of 4	1.51	Up
Larval tubule	234 ± 3	4 of 4	0.70	Down
Larval hindgut	324 ± 14	4 of 4	1.04	None
Larval fat body	206 ± 6	4 of 4	0.70	Down
Larval trachea	195 ± 19	4 of 4	0.63	Down
Larval carcass	180 ± 16	4 of 4	0.58	Down
S2 cells (growing)	969 ± 20	4 of 4	3.11	Up
Whole fly	312 ± 8	4 of 4

/// UDP-sugar transporter in 74C (CG32174 /// frc):

Annotation Number : CG32174
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0042641 /// FBgn0052174
Gbrowse : chr3L:17422246-17426689 (-) // 100.0 //
Probeset : 1640286_at
Accessions : protein= NP_001137962; /// NP_524126; /// NP_648977; /// NP_730270;, nucleotide= NM_001144490; /// NM_079402; /// NM_140720; /// NM_168732;
Pathway : 0000139 // Golgi membrane // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from sequence
Interpro : 0005457 // GDP-fucose transmembrane transporter activity // inferred from direct assay /// 0005458 // GDP-mannose transm
FlyMine data for FBgn0042641 /// FBgn0052174.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	118 ± 6	4 of 4	2.50	Up
Head	59 ± 4	4 of 4	1.30	None
Eye	128 ± 6	4 of 4	2.72	Up
Thoracicoabdominal ganglion	104 ± 3	4 of 4	2.20	Up
Salivary gland	66 ± 6	0 of 4	1.39	None
Crop	47 ± 3	4 of 4	1.00	None
Midgut	103 ± 5	4 of 4	2.20	Up
Tubule	52 ± 3	4 of 4	1.10	None
Hindgut	76 ± 3	4 of 4	1.60	Up
Heart	114 ± 6	4 of 4	2.42	Up
Fat body	57 ± 13	4 of 4	1.22	None
Ovary	37 ± 0	4 of 4	0.80	None
Testis	25 ± 3	4 of 4	0.50	Down
Male accessory glands	20 ± 1	1 of 4	0.40	Down
Virgin spermatheca	29 ± 3	4 of 4	0.63	Down
Mated spermatheca	26 ± 2	4 of 4	0.55	Down
Adult carcass	65 ± 4	3 of 4	1.40	Up
Larval CNS	97 ± 6	4 of 4	2.05	Up
Larval Salivary gland	67 ± 6	4 of 4	1.41	Up
Larval midgut	64 ± 3	4 of 4	1.36	Up
Larval tubule	68 ± 2	4 of 4	1.40	Up
Larval hindgut	64 ± 1	4 of 4	1.36	Up
Larval fat body	33 ± 2	1 of 4	0.70	Down
Larval trachea	98 ± 7	4 of 4	2.08	Up
Larval carcass	70 ± 8	4 of 4	1.48	None
S2 cells (growing)	59 ± 3	4 of 4	1.26	None
Whole fly	47 ± 4	4 of 4

Looking for FBgn0052174. 3 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720