FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0052183 through 18771 annotations produced 1 hits

Ccn (Ccn):

Annotation Number : CG32183
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052183
Gbrowse : chr3L:17683112-17741939 (+) // 100.0 //
Probeset : 1624151_a_at
Accessions : protein= NP_730294; /// NP_730295;, nucleotide= NM_168744; /// NM_168745;
Interpro : 0008083 // growth factor activity // inferred from sequence or structural similarity
FlyMine data for FBgn0052183.
BDGP gene expression has embryonic in situ data for CG32183: 4 pix of staining in 1 body parts.
BioGrid reports that CG32183 interacts with CG4799 CG5023 CG6030 CG8942 CG9184 CG9539 .
TRiP has 2 RNAi stocks for FBgn0052183 available for purchase.
VDRC has 3 RNAi stocks for FBgn0052183 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	668 ± 25	4 of 4	32.00	Up
Head	169 ± 16	4 of 4	8.10	Up
Eye	46 ± 2	4 of 4	2.23	Up
Thoracicoabdominal ganglion	541 ± 18	4 of 4	25.90	Up
Salivary gland	3 ± 2	0 of 4	0.16	Down
Crop	2 ± 0	0 of 4	0.10	Down
Midgut	6 ± 1	0 of 4	0.30	Down
Tubule	2 ± 0	0 of 4	0.10	Down
Hindgut	3 ± 1	0 of 4	0.20	Down
Heart	5 ± 0	1 of 4	0.26	Down
Fat body	4 ± 3	0 of 4	0.22	Down
Ovary	0 ± 0	0 of 4	0.00	Down
Testis	5 ± 1	0 of 4	0.30	Down
Male accessory glands	5 ± 1	0 of 4	0.30	Down
Virgin spermatheca	1 ± 0	0 of 4	0.05	Down
Mated spermatheca	1 ± 0	0 of 4	0.07	Down
Adult carcass	44 ± 4	4 of 4	2.10	Up
Larval CNS	199 ± 16	4 of 4	9.51	Up
Larval Salivary gland	1 ± 0	0 of 4	0.08	Down
Larval midgut	1 ± 0	0 of 4	0.08	Down
Larval tubule	3 ± 1	0 of 4	0.20	Down
Larval hindgut	2 ± 0	0 of 4	0.11	Down
Larval fat body	7 ± 2	0 of 4	0.40	Down
Larval trachea	2 ± 1	0 of 4	0.13	Down
Larval carcass	10 ± 1	0 of 4	0.49	Down
S2 cells (growing)	20 ± 1	4 of 4	0.99	None
Whole fly	20 ± 1	4 of 4

Looking for FBgn0052183. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720