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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0052185 through 18771 annotations produced 1 hits



(CG32185):

Annotation Number : CG32185
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052185
Gbrowse : chr3L:17487988-17488336 (+) // 100.0 //
Probeset : 1634366_at
Accessions : protein= NP_730278;, nucleotide= NM_168735;
FlyMine data for FBgn0052185.
VDRC has 2 RNAi stocks for FBgn0052185 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 10 of 4 0.30None
Head41 ± 153 of 4 4.10None
Eye14 ± 31 of 4 1.40None
Thoracicoabdominal ganglion4 ± 10 of 4 0.40None
Salivary gland12 ± 11 of 4 1.22None
Crop5 ± 20 of 4 0.50None
Midgut21 ± 32 of 4 2.10None
Tubule4 ± 00 of 4 0.40Down
Hindgut6 ± 31 of 4 0.70None
Heart92 ± 154 of 4 9.12Up
Fat body24 ± 92 of 4 2.40None
Ovary1 ± 00 of 4 0.10None
Testis2 ± 00 of 4 0.20None
Male accessory glands1 ± 00 of 4 0.20None
Virgin spermatheca22 ± 171 of 4 2.20None
Mated spermatheca4 ± 20 of 4 0.48None
Adult carcass32 ± 192 of 4 3.20None
Larval CNS2 ± 10 of 4 0.24None
Larval Salivary gland15 ± 51 of 4 1.49None
Larval midgut17 ± 40 of 4 1.70None
Larval tubule12 ± 01 of 4 1.20None
Larval hindgut7 ± 31 of 4 0.69None
Larval fat body167 ± 814 of 416.50None
Larval trachea9 ± 61 of 4 0.95None
Larval carcass34 ± 102 of 4 3.45None
S2 cells (growing)42 ± 34 of 4 4.22Up
Whole fly10 ± 41 of 4

Looking for FBgn0052185. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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