Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0052202 through 18771 annotations produced 1 hits



(CG32202):

Annotation Number : CG32202
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052202
Gbrowse : chr3L:18675400-18675863 (+) // 100.0 //
Probeset : 1638691_at
Accessions : protein= NP_730354;, nucleotide= NM_168774;
FlyMine data for FBgn0052202.
VDRC has 3 RNAi stocks for FBgn0052202 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain106 ± 14 of 4 1.10Up
Head57 ± 34 of 4 0.60Down
Eye77 ± 54 of 4 0.83None
Thoracicoabdominal ganglion103 ± 14 of 4 1.10None
Salivary gland85 ± 54 of 4 0.92None
Crop71 ± 44 of 4 0.80Down
Midgut48 ± 14 of 4 0.50Down
Tubule65 ± 34 of 4 0.70Down
Hindgut51 ± 24 of 4 0.50Down
Heart68 ± 44 of 4 0.73Down
Fat body46 ± 84 of 4 0.49Down
Ovary208 ± 54 of 4 2.20Up
Testis32 ± 14 of 4 0.30Down
Male accessory glands125 ± 84 of 4 1.30Up
Virgin spermatheca69 ± 24 of 4 0.74Down
Mated spermatheca82 ± 84 of 4 0.88None
Adult carcass50 ± 34 of 4 0.50Down
Larval CNS126 ± 124 of 4 1.35Up
Larval Salivary gland166 ± 84 of 4 1.78Up
Larval midgut45 ± 24 of 4 0.49Down
Larval tubule75 ± 14 of 4 0.80Down
Larval hindgut55 ± 34 of 4 0.60Down
Larval fat body38 ± 34 of 4 0.40Down
Larval trachea84 ± 104 of 4 0.91None
Larval carcass32 ± 34 of 4 0.35Down
S2 cells (growing)110 ± 04 of 4 1.18Up
Whole fly93 ± 44 of 4

Looking for FBgn0052202. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime