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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0052251 through 18771 annotations produced 1 hits



(CG32251):

Annotation Number : CG32251
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052251
Gbrowse : chr3L:4313634-4318473 (+) // 100.0 //
Probeset : 1633138_at
Accessions : protein= NP_728981;, nucleotide= NM_168080;
FlyMine data for FBgn0052251.
TRiP has 1 RNAi stocks for FBgn0052251 available for purchase.
VDRC has 2 RNAi stocks for FBgn0052251 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.00Down
Head9 ± 00 of 4 0.10Down
Eye2 ± 00 of 4 0.03Down
Thoracicoabdominal ganglion4 ± 10 of 4 0.00Down
Salivary gland18 ± 50 of 4 0.21Down
Crop6 ± 00 of 4 0.10Down
Midgut17 ± 30 of 4 0.20Down
Tubule6 ± 10 of 4 0.10Down
Hindgut8 ± 10 of 4 0.10Down
Heart2 ± 10 of 4 0.03Down
Fat body13 ± 42 of 4 0.15Down
Ovary282 ± 54 of 4 3.20Up
Testis4 ± 00 of 4 0.10Down
Male accessory glands12 ± 10 of 4 0.10Down
Virgin spermatheca15 ± 23 of 4 0.18Down
Mated spermatheca19 ± 42 of 4 0.21Down
Adult carcass17 ± 30 of 4 0.20Down
Larval CNS72 ± 54 of 4 0.81Down
Larval Salivary gland54 ± 34 of 4 0.61Down
Larval midgut18 ± 22 of 4 0.20Down
Larval tubule12 ± 12 of 4 0.10Down
Larval hindgut27 ± 14 of 4 0.31Down
Larval fat body10 ± 11 of 4 0.10Down
Larval trachea39 ± 84 of 4 0.44Down
Larval carcass38 ± 44 of 4 0.43Down
S2 cells (growing)51 ± 34 of 4 0.57Down
Whole fly89 ± 44 of 4

Looking for FBgn0052251. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime