FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0052267 through 18771 annotations produced 1 hits

(CG32267):

Annotation Number : CG32267
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052267
Gbrowse : chr3L:3471542-3472113 (-) // 100.0 //
Probeset : 1630453_at
Accessions : protein= NP_728885;, nucleotide= NM_168032;
FlyMine data for FBgn0052267.
BioGrid reports that CG32267 interacts with CG4697 CG9986 .
VDRC has 1 RNAi stocks for FBgn0052267 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	515 ± 14	4 of 4	0.70	Down
Head	605 ± 21	4 of 4	0.80	Down
Eye	728 ± 27	4 of 4	1.01	None
Thoracicoabdominal ganglion	568 ± 26	4 of 4	0.80	Down
Salivary gland	1416 ± 47	4 of 4	1.96	Up
Crop	1078 ± 11	4 of 4	1.50	Up
Midgut	1026 ± 10	4 of 4	1.40	Up
Tubule	1308 ± 26	4 of 4	1.80	Up
Hindgut	1204 ± 22	4 of 4	1.70	Up
Heart	656 ± 15	4 of 4	0.91	None
Fat body	1035 ± 57	4 of 4	1.43	Up
Ovary	1042 ± 10	4 of 4	1.40	Up
Testis	1193 ± 11	4 of 4	1.70	Up
Male accessory glands	877 ± 44	4 of 4	1.20	Up
Virgin spermatheca	824 ± 38	4 of 4	1.14	None
Mated spermatheca	891 ± 39	4 of 4	1.23	Up
Adult carcass	602 ± 41	4 of 4	0.80	None
Larval CNS	841 ± 30	4 of 4	1.16	Up
Larval Salivary gland	1651 ± 49	4 of 4	2.28	Up
Larval midgut	696 ± 25	4 of 4	0.96	None
Larval tubule	941 ± 19	4 of 4	1.30	Up
Larval hindgut	1223 ± 42	4 of 4	1.69	Up
Larval fat body	652 ± 13	4 of 4	0.90	None
Larval trachea	799 ± 61	4 of 4	1.11	None
Larval carcass	1071 ± 69	4 of 4	1.48	Up
S2 cells (growing)	805 ± 19	4 of 4	1.11	None
Whole fly	723 ± 33	4 of 4

Looking for FBgn0052267. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720