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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0052269 through 18771 annotations produced 1 hits



/// (CG32269 /// CG32270):

Annotation Number : CG33161
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052269 /// FBgn0052270
Gbrowse : chr3L:3206944-3208982 (-) // 100.0 //
Probeset : 1628506_a_at
Accessions : protein= NP_647788; /// NP_728837;, nucleotide= NM_139531; /// NM_168003;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity /
FlyMine data for FBgn0052269 /// FBgn0052270.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 0.20Down
Head2 10 of 4 0.40None
Eye4 10 of 4 0.71None
Thoracicoabdominal ganglion4 10 of 4 0.60None
Salivary gland8 30 of 4 1.30None
Crop5 20 of 4 0.90None
Midgut10 20 of 4 1.60None
Tubule3 00 of 4 0.60Down
Hindgut4 10 of 4 0.70None
Heart1 00 of 4 0.28Down
Fat body5 20 of 4 0.84None
Ovary3 00 of 4 0.50Down
Testis1 00 of 4 0.20Down
Male accessory glands7 10 of 4 1.20None
Virgin spermatheca7 00 of 4 1.16None
Mated spermatheca4 10 of 4 0.68None
Adult carcass9 20 of 4 1.50None
Larval CNS3 10 of 4 0.48Down
Larval Salivary gland10 20 of 4 1.72None
Larval midgut14 41 of 4 2.32None
Larval tubule2 10 of 4 0.40Down
Larval hindgut2 00 of 4 0.45Down
Larval fat body1 00 of 4 0.20Down
Larval trachea4 30 of 4 0.66None
Larval carcass4 00 of 4 0.75None
S2 cells (growing)3 10 of 4 0.60None
Whole fly6 00 of 4

Looking for FBgn0052269. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime