Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0052301 through 18771 annotations produced 1 hits



(CG32301):

Annotation Number : CG32301
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052301
Gbrowse : chr3L:2244529-2248483 (+) // 100.0 //
Probeset : 1624242_at
Accessions : protein= NP_001163327; /// NP_728724;, nucleotide= NM_001169856; /// NM_167939;
Pathway : 0016021 // integral to membrane // inferred from sequence or structural similarity
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004016 // adenylate cyclase activity // inferr
FlyMine data for FBgn0052301.
Homophila reports that CG32301 is a close match (1e-15) to human gene NPR2;ANPRB;AMDM (NP_003986), a gene associated with Acromesomelic dysplasia, Maroteaux type, 602875 (3).
VDRC has 3 RNAi stocks for FBgn0052301 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 10 of 4 0.60None
Head1 00 of 4 0.20None
Eye2 00 of 4 0.57None
Thoracicoabdominal ganglion2 00 of 4 0.60None
Salivary gland2 00 of 4 0.49None
Crop2 10 of 4 0.60None
Midgut1 00 of 4 0.40None
Tubule2 00 of 4 0.50Down
Hindgut0 00 of 4 0.10Down
Heart0 00 of 4 0.19Down
Fat body2 20 of 4 0.52None
Ovary1 00 of 4 0.30None
Testis58 14 of 413.30Up
Male accessory glands1 00 of 4 0.40None
Virgin spermatheca1 00 of 4 0.44None
Mated spermatheca1 00 of 4 0.32None
Adult carcass1 00 of 4 0.40None
Larval CNS2 00 of 4 0.64None
Larval Salivary gland2 10 of 4 0.52None
Larval midgut0 00 of 4 0.19Down
Larval tubule1 00 of 4 0.40None
Larval hindgut1 00 of 4 0.28None
Larval fat body9 51 of 4 2.10None
Larval trachea3 31 of 4 0.81None
Larval carcass4 00 of 4 0.91None
S2 cells (growing)1 00 of 4 0.39None
Whole fly4 10 of 4

Looking for FBgn0052301. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime