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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0052319 through 18771 annotations produced 1 hits



(CG32319):

Annotation Number : CG32319
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052319
Gbrowse : chr3L:1471267-1472060 (-) // 100.0 //
Probeset : 1631458_at
Accessions : protein= NP_728606;, nucleotide= NM_167877;
Interpro : 0008080 // N-acetyltransferase activity // inferred from sequence or structural similarity /// 0008080 // N-acetyltransf
FlyMine data for FBgn0052319.
VDRC has 1 RNAi stocks for FBgn0052319 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.20Down
Head1 ± 00 of 4 0.20None
Eye2 ± 11 of 4 0.41None
Thoracicoabdominal ganglion2 ± 00 of 4 0.30None
Salivary gland8 ± 40 of 4 1.20None
Crop2 ± 00 of 4 0.40None
Midgut7 ± 10 of 4 1.00None
Tubule2 ± 00 of 4 0.40Down
Hindgut2 ± 10 of 4 0.40None
Heart2 ± 10 of 4 0.33None
Fat body5 ± 21 of 4 0.74None
Ovary0 ± 00 of 4 0.10Down
Testis92 ± 34 of 412.90Up
Male accessory glands1 ± 00 of 4 0.20Down
Virgin spermatheca4 ± 10 of 4 0.60None
Mated spermatheca6 ± 10 of 4 0.87None
Adult carcass9 ± 10 of 4 1.30None
Larval CNS1 ± 10 of 4 0.19Down
Larval Salivary gland3 ± 10 of 4 0.43None
Larval midgut3 ± 10 of 4 0.50None
Larval tubule3 ± 10 of 4 0.50None
Larval hindgut1 ± 10 of 4 0.26None
Larval fat body15 ± 71 of 4 2.10None
Larval trachea1 ± 21 of 4 0.28None
Larval carcass2 ± 10 of 4 0.29None
S2 cells (growing)1 ± 00 of 4 0.21Down
Whole fly7 ± 13 of 4

Looking for FBgn0052319. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime