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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0052351 through 18771 annotations produced 1 hits



(CG32351):

Annotation Number : CG32351
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052351
Gbrowse : chr3L:8612987-8615191 (+) // 99.81 //
Probeset : 1628872_at
Accessions : protein= NP_729394;, nucleotide= NM_168282;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or st
Interpro : 0004177 // aminopeptidase activity // inferred from sequence or structural similarity /// 0004177 // aminopeptidase acti
FlyMine data for FBgn0052351.
VDRC has 4 RNAi stocks for FBgn0052351 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.00Down
Head6 ± 21 of 4 0.00Down
Eye2 ± 10 of 4 0.01Down
Thoracicoabdominal ganglion0 ± 00 of 4 0.00Down
Salivary gland10 ± 20 of 4 0.02Down
Crop4 ± 10 of 4 0.00Down
Midgut1 ± 00 of 4 0.00Down
Tubule4 ± 00 of 4 0.00Down
Hindgut1 ± 00 of 4 0.00Down
Heart2 ± 10 of 4 0.01Down
Fat body2 ± 20 of 4 0.00Down
Ovary3 ± 00 of 4 0.00Down
Testis2833 ± 944 of 4 5.00Up
Male accessory glands5 ± 40 of 4 0.00Down
Virgin spermatheca1 ± 00 of 4 0.00Down
Mated spermatheca3 ± 20 of 4 0.01Down
Adult carcass14 ± 21 of 4 0.00Down
Larval CNS1 ± 10 of 4 0.00Down
Larval Salivary gland3 ± 10 of 4 0.01Down
Larval midgut1 ± 00 of 4 0.00Down
Larval tubule1 ± 00 of 4 0.00Down
Larval hindgut1 ± 00 of 4 0.00Down
Larval fat body822 ± 4024 of 4 1.50None
Larval trachea18 ± 261 of 4 0.03Down
Larval carcass5 ± 20 of 4 0.01Down
S2 cells (growing)0 ± 00 of 4 0.00Down
Whole fly562 ± 464 of 4

Looking for FBgn0052351. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime