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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0052365 through 18771 annotations produced 1 hits



(CG32365):

Annotation Number : CG32365
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052365
Gbrowse : chr3L:7862143-7887914 (+) // 100.0 //
Probeset : 1628913_at
Accessions : protein= NP_729304;, nucleotide= NM_168240;
FlyMine data for FBgn0052365.
BioGrid reports that CG32365 interacts with CG3245 .
VDRC has 1 RNAi stocks for FBgn0052365 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain18 ± 14 of 4 0.40Down
Head11 ± 31 of 4 0.30Down
Eye36 ± 14 of 4 0.80None
Thoracicoabdominal ganglion10 ± 21 of 4 0.20Down
Salivary gland17 ± 60 of 4 0.38Down
Crop22 ± 14 of 4 0.50Down
Midgut20 ± 14 of 4 0.50Down
Tubule9 ± 10 of 4 0.20Down
Hindgut12 ± 21 of 4 0.30Down
Heart5 ± 10 of 4 0.12Down
Fat body9 ± 40 of 4 0.21Down
Ovary138 ± 44 of 4 3.00Up
Testis11 ± 12 of 4 0.30Down
Male accessory glands111 ± 74 of 4 2.40Up
Virgin spermatheca10 ± 00 of 4 0.23Down
Mated spermatheca13 ± 10 of 4 0.30Down
Adult carcass6 ± 20 of 4 0.10Down
Larval CNS11 ± 13 of 4 0.25Down
Larval Salivary gland10 ± 10 of 4 0.22Down
Larval midgut13 ± 21 of 4 0.29Down
Larval tubule11 ± 20 of 4 0.20Down
Larval hindgut11 ± 21 of 4 0.25Down
Larval fat body10 ± 10 of 4 0.20Down
Larval trachea48 ± 164 of 4 1.05None
Larval carcass9 ± 10 of 4 0.22Down
S2 cells (growing)9 ± 10 of 4 0.20Down
Whole fly45 ± 44 of 4

Looking for FBgn0052365. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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