Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
About & FAQ
Top 50
Original data
Interesting meta-analysis

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0052383 through 18771 annotations produced 1 hits

CG32383 (sphinx1):

Annotation Number : CG32383
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052383
Gbrowse : chr3L:7431707-7432505 (-) // 100.0 //
Probeset : 1626055_at
Accessions : protein= NP_729255;, nucleotide= NM_168214;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity /
FlyMine data for FBgn0052383.
Homophila reports that CG32383 is a close match (6e-11) to human gene PRSS2;TRY2 (NP_002761), a gene associated with {Pancreatitis, chronic, protection against} (3).
VDRC has 5 RNAi stocks for FBgn0052383 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 10 of 4 0.20Down
Head2 10 of 4 0.20Down
Eye2 10 of 4 0.15Down
Thoracicoabdominal ganglion1 00 of 4 0.10Down
Salivary gland19 41 of 4 1.12None
Crop4 10 of 4 0.30Down
Midgut9 10 of 4 0.60Down
Tubule4 00 of 4 0.30Down
Hindgut2 10 of 4 0.10Down
Heart4 10 of 4 0.28Down
Fat body11 33 of 4 0.67None
Ovary2 00 of 4 0.10Down
Testis2 10 of 4 0.10Down
Male accessory glands2252 454 of 4132.70Up
Virgin spermatheca10 11 of 4 0.62Down
Mated spermatheca12 22 of 4 0.72None
Adult carcass3 00 of 4 0.20Down
Larval CNS5 40 of 4 0.35Down
Larval Salivary gland8 12 of 4 0.51Down
Larval midgut8 00 of 4 0.47Down
Larval tubule1 00 of 4 0.10Down
Larval hindgut3 10 of 4 0.20Down
Larval fat body2 00 of 4 0.20Down
Larval trachea1 20 of 4 0.11Down
Larval carcass3 10 of 4 0.22Down
S2 cells (growing)2 00 of 4 0.13Down
Whole fly17 13 of 4

Looking for FBgn0052383. 1 entries matched from 18771, in 2 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime