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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0052448 through 18771 annotations produced 1 hits



(CG32448):

Annotation Number : CG32448
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052448
Gbrowse : chr3L:21820945-21821678 (-) // 100.0 //
Probeset : 1638634_at
Accessions : protein= NP_730691;, nucleotide= NM_168939;
FlyMine data for FBgn0052448.
VDRC has 1 RNAi stocks for FBgn0052448 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain137 24 of 4 2.10Up
Head105 64 of 4 1.60Up
Eye111 74 of 4 1.69Up
Thoracicoabdominal ganglion126 74 of 4 1.90Up
Salivary gland164 154 of 4 2.49Up
Crop72 44 of 4 1.10None
Midgut108 74 of 4 1.60Up
Tubule89 14 of 4 1.30Up
Hindgut111 24 of 4 1.70Up
Heart151 34 of 4 2.30Up
Fat body148 94 of 4 2.25Up
Ovary48 04 of 4 0.70Down
Testis100 34 of 4 1.50Up
Male accessory glands84 34 of 4 1.30Up
Virgin spermatheca78 24 of 4 1.19None
Mated spermatheca102 84 of 4 1.55Up
Adult carcass107 54 of 4 1.60Up
Larval CNS110 64 of 4 1.67Up
Larval Salivary gland149 74 of 4 2.26Up
Larval midgut63 34 of 4 0.97None
Larval tubule111 44 of 4 1.70Up
Larval hindgut123 34 of 4 1.87Up
Larval fat body566 524 of 4 8.60Up
Larval trachea97 94 of 4 1.48Up
Larval carcass73 74 of 4 1.12None
S2 cells (growing)110 24 of 4 1.68Up
Whole fly66 44 of 4

Looking for FBgn0052448. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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