FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0052451 through 18771 annotations produced 2 hits

Secretory Pathway Calcium atpase (SPoCk):

Annotation Number : CG32451
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052451
Gbrowse : chr3L:22766637-22779813 (+) // 100.0 //
Probeset : 1638445_a_at
Accessions : protein= NP_001097666; /// NP_001163496; /// NP_730742; /// NP_730744; /// NP_730745;, nucleotide= NM_001104196; /// NM_001170025; /// NM_168961; /// NM_168962; /// NM_168963;
Pathway : 0005777 // peroxisome // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /
Interpro : "0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from
FlyMine data for FBgn0052451.
BDGP gene expression has embryonic in situ data for CG32451: 4 pix of staining in 1 body parts.
Homophila reports that CG32451 is a close match (1e-12) to human gene ATP13A2;KRPPD;PARK9 (NP_071372), a gene associated with Parkinson disease 9, 606693 (3).
BioGrid reports that CG32451 interacts with CG6905 CG4046 CG6127 CG6510 CG6684 CG6779 CG9117 CG9804 .
TRiP has 1 RNAi stocks for FBgn0052451 available for purchase.
VDRC has 4 RNAi stocks for FBgn0052451 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1137 ± 29	4 of 4	14.40	Up
Head	555 ± 32	4 of 4	7.10	Up
Eye	1095 ± 76	4 of 4	13.92	Up
Thoracicoabdominal ganglion	1269 ± 52	4 of 4	16.10	Up
Salivary gland	86 ± 9	4 of 4	1.09	None
Crop	64 ± 2	4 of 4	0.80	Down
Midgut	41 ± 2	4 of 4	0.50	Down
Tubule	32 ± 2	4 of 4	0.40	Down
Hindgut	66 ± 5	4 of 4	0.80	None
Heart	31 ± 0	4 of 4	0.40	Down
Fat body	91 ± 15	4 of 4	1.16	None
Ovary	9 ± 1	2 of 4	0.10	Down
Testis	10 ± 1	3 of 4	0.10	Down
Male accessory glands	236 ± 14	4 of 4	3.00	Up
Virgin spermatheca	80 ± 2	4 of 4	1.02	None
Mated spermatheca	99 ± 11	4 of 4	1.26	None
Adult carcass	76 ± 6	4 of 4	1.00	None
Larval CNS	520 ± 17	4 of 4	6.61	Up
Larval Salivary gland	50 ± 4	4 of 4	0.64	Down
Larval midgut	66 ± 9	4 of 4	0.84	None
Larval tubule	28 ± 3	4 of 4	0.40	Down
Larval hindgut	47 ± 1	4 of 4	0.60	Down
Larval fat body	66 ± 5	4 of 4	0.80	None
Larval trachea	72 ± 29	4 of 4	0.93	None
Larval carcass	39 ± 4	4 of 4	0.50	Down
S2 cells (growing)	47 ± 4	4 of 4	0.60	Down
Whole fly	78 ± 3	4 of 4

Secretory Pathway Calcium atpase (SPoCk):

Annotation Number : CT34128
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052451
Gbrowse : chr3L:22753076-22753714 (+) // 100.0 //
Probeset : 1633273_at
Accessions : protein= NP_001097666; /// NP_001163496; /// NP_730742; /// NP_730744; /// NP_730745;, nucleotide= NM_001104196; /// NM_001170025; /// NM_168961; /// NM_168962; /// NM_168963;
Pathway : 0005777 // peroxisome // inferred from direct assay /// 0005783 // endoplasmic reticulum // inferred from direct assay /
Interpro : "0000166 // nucleotide binding // inferred from electronic annotation /// 0003824 // catalytic activity // inferred from
FlyMine data for FBgn0052451.
BDGP gene expression has embryonic in situ data for CG32451: 4 pix of staining in 1 body parts.
TRiP has 1 RNAi stocks for FBgn0052451 available for purchase.
VDRC has 4 RNAi stocks for FBgn0052451 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.60	None
Head	3 ± 1	0 of 4	1.90	None
Eye	1 ± 0	0 of 4	0.67	None
Thoracicoabdominal ganglion	1 ± 0	0 of 4	0.90	None
Salivary gland	6 ± 3	0 of 4	3.67	None
Crop	5 ± 1	0 of 4	3.20	None
Midgut	2 ± 0	0 of 4	1.70	None
Tubule	2 ± 0	0 of 4	1.20	None
Hindgut	2 ± 0	0 of 4	1.60	None
Heart	0 ± 0	0 of 4	0.54	None
Fat body	1 ± 0	0 of 4	0.97	None
Ovary	1 ± 0	0 of 4	0.60	None
Testis	19 ± 1	3 of 4	11.40	Up
Male accessory glands	9 ± 2	0 of 4	5.50	None
Virgin spermatheca	1 ± 0	0 of 4	0.85	None
Mated spermatheca	2 ± 0	0 of 4	1.33	None
Adult carcass	5 ± 1	0 of 4	3.10	None
Larval CNS	1 ± 0	0 of 4	0.61	None
Larval Salivary gland	6 ± 2	0 of 4	4.03	None
Larval midgut	1 ± 0	0 of 4	0.94	None
Larval tubule	2 ± 0	0 of 4	1.60	None
Larval hindgut	1 ± 0	0 of 4	0.61	None
Larval fat body	2 ± 0	0 of 4	1.20	None
Larval trachea	0 ± 0	0 of 4	0.46	None
Larval carcass	1 ± 0	0 of 4	1.07	None
S2 cells (growing)	1 ± 0	0 of 4	0.91	None
Whole fly	1 ± 0	0 of 4

Looking for FBgn0052451. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720