Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

 University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0052459 through 18771 annotations produced 1 hits


(CG32459):

Annotation Number : CG32459
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052459
Gbrowse : chr3L:22847680-22849175 (-) // 100.0 //
Probeset : 1631393_at
Accessions : protein= NP_730752;, nucleotide= NM_168968;
FlyMine data for FBgn0052459.
BDGP gene expression has embryonic in situ data for CG32459: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0052459 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 00 of 4 0.00Down
Head4 ± 10 of 4 0.00Down
Eye4 ± 01 of 4 0.03Down
Thoracicoabdominal ganglion3 ± 10 of 4 0.00Down
Salivary gland9 ± 20 of 4 0.07Down
Crop2 ± 00 of 4 0.00Down
Midgut0 ± 00 of 4 0.00Down
Tubule3 ± 00 of 4 0.00Down
Hindgut6 ± 00 of 4 0.00Down
Heart3 ± 00 of 4 0.03Down
Fat body5 ± 31 of 4 0.05Down
Ovary3 ± 11 of 4 0.00Down
Testis1426 ± 244 of 411.60Up
Male accessory glands1 ± 00 of 4 0.00Down
Virgin spermatheca6 ± 00 of 4 0.05Down
Mated spermatheca8 ± 12 of 4 0.07Down
Adult carcass12 ± 00 of 4 0.10Down
Larval CNS3 ± 12 of 4 0.03Down
Larval Salivary gland7 ± 11 of 4 0.06Down
Larval midgut3 ± 11 of 4 0.03Down
Larval tubule3 ± 10 of 4 0.00Down
Larval hindgut3 ± 20 of 4 0.03Down
Larval fat body135 ± 744 of 4 1.10None
Larval trachea8 ± 102 of 4 0.07Down
Larval carcass5 ± 00 of 4 0.05Down
S2 cells (growing)3 ± 10 of 4 0.02Down
Whole fly122 ± 144 of 4

Looking for FBgn0052459. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime