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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0052479 through 18771 annotations produced 1 hits



(CG32479):

Annotation Number : CG32479
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052479
Gbrowse : chr3L:871902-893520 (+) // 99.78 //
Probeset : 1632791_at
Accessions : protein= NP_728554;, nucleotide= NM_167844;
Interpro : 0004221 // ubiquitin thiolesterase activity // inferred from electronic annotation /// 0016787 // hydrolase activity //
FlyMine data for FBgn0052479.
TRiP has 1 RNAi stocks for FBgn0052479 available for purchase.
VDRC has 2 RNAi stocks for FBgn0052479 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain229 44 of 4 0.80Down
Head201 184 of 4 0.70Down
Eye126 74 of 4 0.43Down
Thoracicoabdominal ganglion228 84 of 4 0.80Down
Salivary gland125 124 of 4 0.43Down
Crop293 64 of 4 1.00None
Midgut263 74 of 4 0.90None
Tubule190 134 of 4 0.60Down
Hindgut208 104 of 4 0.70Down
Heart284 284 of 4 0.97None
Fat body648 1034 of 4 2.21Up
Ovary600 214 of 4 2.00Up
Testis110 94 of 4 0.40Down
Male accessory glands296 114 of 4 1.00None
Virgin spermatheca268 364 of 4 0.91None
Mated spermatheca293 74 of 4 1.00None
Adult carcass240 204 of 4 0.80None
Larval CNS540 614 of 4 1.84Up
Larval Salivary gland514 514 of 4 1.75Up
Larval midgut276 114 of 4 0.94None
Larval tubule319 104 of 4 1.10None
Larval hindgut313 104 of 4 1.07None
Larval fat body304 194 of 4 1.00None
Larval trachea305 644 of 4 1.04None
Larval carcass372 224 of 4 1.27Up
S2 cells (growing)614 224 of 4 2.09Up
Whole fly293 134 of 4

Looking for FBgn0052479. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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