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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0052528 through 18771 annotations produced 1 hits



Parvin (CG32528):

Annotation Number : CG32528
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052528
Gbrowse : chrX:19640089-19642491 (+) // 100.0 //
Probeset : 1638290_at
Accessions : protein= NP_608352;, nucleotide= NM_134508;
Interpro : 0003779 // actin binding // inferred from sequence or structural similarity
FlyMine data for FBgn0052528.
VDRC has 2 RNAi stocks for FBgn0052528 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain245 104 of 4 0.70Down
Head416 144 of 4 1.20Up
Eye437 294 of 4 1.23None
Thoracicoabdominal ganglion255 64 of 4 0.70Down
Salivary gland449 194 of 4 1.26Up
Crop851 134 of 4 2.40Up
Midgut269 94 of 4 0.80Down
Tubule478 364 of 4 1.30Up
Hindgut456 64 of 4 1.30Up
Heart524 234 of 4 1.47Up
Fat body377 384 of 4 1.06None
Ovary482 54 of 4 1.40Up
Testis116 44 of 4 0.30Down
Male accessory glands232 74 of 4 0.70Down
Virgin spermatheca441 154 of 4 1.24Up
Mated spermatheca490 194 of 4 1.38Up
Adult carcass441 134 of 4 1.20Up
Larval CNS248 264 of 4 0.70Down
Larval Salivary gland512 214 of 4 1.44Up
Larval midgut383 54 of 4 1.07Up
Larval tubule523 214 of 4 1.50Up
Larval hindgut540 164 of 4 1.52Up
Larval fat body301 244 of 4 0.80None
Larval trachea668 314 of 4 1.88Up
Larval carcass668 144 of 4 1.88Up
S2 cells (growing)480 154 of 4 1.35Up
Whole fly356 74 of 4

Looking for FBgn0052528. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime