FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0052547 through 18771 annotations produced 3 hits

(CG32547):

Annotation Number : CG15050
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052547
Gbrowse : chrX:18338270-18341300 (-) // 100.0 //
Probeset : 1635994_at
Accessions : protein= NP_728174;, nucleotide= NM_167622;
Pathway : 0016021 // integral to membrane // inferred from sequence or structural similarity /// 0016021 // integral to membrane /
Interpro : 0004872 // receptor activity // inferred from electronic annotation /// 0008188 // neuropeptide receptor activity // inf
FlyMine data for FBgn0052547.
TRiP has 1 RNAi stocks for FBgn0052547 available for purchase.
VDRC has 2 RNAi stocks for FBgn0052547 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	6 ± 2	0 of 4	7.50	None
Head	1 ± 0	0 of 4	1.80	Up
Eye	3 ± 0	0 of 4	4.09	Up
Thoracicoabdominal ganglion	2 ± 1	0 of 4	3.40	None
Salivary gland	3 ± 1	0 of 4	4.30	None
Crop	0 ± 0	0 of 4	1.10	None
Midgut	2 ± 0	0 of 4	3.20	None
Tubule	1 ± 0	0 of 4	2.10	None
Hindgut	1 ± 0	0 of 4	1.70	Up
Heart	0 ± 0	0 of 4	1.03	None
Fat body	1 ± 0	0 of 4	1.91	None
Ovary	0 ± 0	0 of 4	0.80	None
Testis	0 ± 0	0 of 4	1.00	None
Male accessory glands	2 ± 1	0 of 4	3.00	None
Virgin spermatheca	1 ± 0	0 of 4	1.45	None
Mated spermatheca	1 ± 0	0 of 4	1.48	None
Adult carcass	1 ± 0	0 of 4	1.80	Up
Larval CNS	0 ± 0	0 of 4	1.09	None
Larval Salivary gland	1 ± 0	0 of 4	1.61	None
Larval midgut	1 ± 0	0 of 4	1.58	None
Larval tubule	0 ± 0	0 of 4	1.10	None
Larval hindgut	0 ± 0	0 of 4	0.85	None
Larval fat body	2 ± 0	0 of 4	3.50	None
Larval trachea	2 ± 2	0 of 4	2.85	None
Larval carcass	1 ± 0	0 of 4	1.70	None
S2 cells (growing)	1 ± 0	0 of 4	1.33	None
Whole fly	0 ± 0	0 of 4

(CG32547):

Annotation Number : CG12610
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052547
Gbrowse : chrX:18355752-18356560 (-) // 100.0 //
Probeset : 1625956_at
Accessions : protein= NP_728174;, nucleotide= NM_167622;
Pathway : 0016021 // integral to membrane // inferred from sequence or structural similarity /// 0016021 // integral to membrane /
Interpro : 0004872 // receptor activity // inferred from electronic annotation /// 0008188 // neuropeptide receptor activity // inf
FlyMine data for FBgn0052547.
TRiP has 1 RNAi stocks for FBgn0052547 available for purchase.
VDRC has 2 RNAi stocks for FBgn0052547 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	5 ± 1	0 of 4	1.30	None
Head	6 ± 2	0 of 4	1.60	None
Eye	3 ± 1	0 of 4	0.88	None
Thoracicoabdominal ganglion	6 ± 1	0 of 4	1.40	None
Salivary gland	6 ± 2	0 of 4	1.44	None
Crop	6 ± 1	0 of 4	1.50	None
Midgut	5 ± 2	0 of 4	1.30	None
Tubule	3 ± 1	0 of 4	0.80	None
Hindgut	7 ± 1	0 of 4	1.60	None
Heart	2 ± 1	0 of 4	0.48	None
Fat body	4 ± 2	0 of 4	1.01	None
Ovary	3 ± 1	0 of 4	0.70	None
Testis	4 ± 1	1 of 4	1.10	None
Male accessory glands	5 ± 2	0 of 4	1.30	None
Virgin spermatheca	3 ± 1	0 of 4	0.83	None
Mated spermatheca	2 ± 0	0 of 4	0.60	None
Adult carcass	5 ± 1	0 of 4	1.20	None
Larval CNS	3 ± 3	0 of 4	0.76	None
Larval Salivary gland	6 ± 2	0 of 4	1.42	None
Larval midgut	1 ± 0	0 of 4	0.44	None
Larval tubule	3 ± 1	0 of 4	0.80	None
Larval hindgut	3 ± 1	0 of 4	0.72	None
Larval fat body	5 ± 2	0 of 4	1.20	None
Larval trachea	2 ± 1	0 of 4	0.55	None
Larval carcass	6 ± 0	0 of 4	1.61	None
S2 cells (growing)	8 ± 0	0 of 4	1.87	None
Whole fly	4 ± 2	0 of 4

():

Annotation Number : CG15049
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID :
Gbrowse : chrX:18352728-18354214 (-) // 100.0 //
Probeset : 1636881_at
Accessions : protein= , nucleotide=

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	12 ± 2	3 of 4	0.80	None
Head	12 ± 1	1 of 4	0.80	None
Eye	6 ± 1	0 of 4	0.41	Down
Thoracicoabdominal ganglion	18 ± 0	2 of 4	1.10	None
Salivary gland	11 ± 3	0 of 4	0.74	None
Crop	16 ± 3	1 of 4	1.10	None
Midgut	24 ± 2	4 of 4	1.50	Up
Tubule	10 ± 1	0 of 4	0.60	Down
Hindgut	14 ± 0	3 of 4	0.90	None
Heart	6 ± 1	0 of 4	0.41	Down
Fat body	15 ± 2	2 of 4	1.01	None
Ovary	10 ± 2	1 of 4	0.60	None
Testis	22 ± 1	2 of 4	1.40	None
Male accessory glands	17 ± 2	0 of 4	1.10	None
Virgin spermatheca	11 ± 1	2 of 4	0.69	None
Mated spermatheca	13 ± 2	1 of 4	0.85	None
Adult carcass	21 ± 4	0 of 4	1.40	None
Larval CNS	9 ± 3	0 of 4	0.62	None
Larval Salivary gland	16 ± 2	1 of 4	1.02	None
Larval midgut	32 ± 2	0 of 4	2.04	Up
Larval tubule	22 ± 2	2 of 4	1.40	None
Larval hindgut	14 ± 1	1 of 4	0.94	None
Larval fat body	27 ± 3	4 of 4	1.80	Up
Larval trachea	10 ± 2	0 of 4	0.66	None
Larval carcass	24 ± 3	1 of 4	1.54	None
S2 cells (growing)	13 ± 0	3 of 4	0.87	None
Whole fly	15 ± 2	2 of 4

Looking for FBgn0052547. 3 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720