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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0052557 through 18771 annotations produced 1 hits



(CG32557):

Annotation Number : CG32557
Flybase ID : FBgn0052557
Gbrowse : chrX:17746991-17750156 (-) // 100.0 //
Probeset : 1635207_at
Accessions : protein= NP_573249;, nucleotide= NM_133021;
Interpro : 0005507 // copper ion binding // inferred from sequence or structural similarity /// 0005507 // copper ion binding // in
FlyMine data for FBgn0052557.
VDRC has 1 RNAi stocks for FBgn0052557 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 0.00Down
Head10 41 of 4 0.30Down
Eye2 00 of 4 0.08Down
Thoracicoabdominal ganglion2 00 of 4 0.10Down
Salivary gland9 50 of 4 0.32Down
Crop20 42 of 4 0.70None
Midgut281 84 of 4 9.60Up
Tubule1 00 of 4 0.10Down
Hindgut3 10 of 4 0.10Down
Heart2 00 of 4 0.08Down
Fat body2 00 of 4 0.08Down
Ovary5 00 of 4 0.20Down
Testis6 10 of 4 0.20Down
Male accessory glands7 20 of 4 0.20Down
Virgin spermatheca2 00 of 4 0.09Down
Mated spermatheca5 10 of 4 0.17Down
Adult carcass9 40 of 4 0.30Down
Larval CNS2 10 of 4 0.08Down
Larval Salivary gland3 10 of 4 0.11Down
Larval midgut272 134 of 4 9.30Up
Larval tubule4 10 of 4 0.20Down
Larval hindgut3 00 of 4 0.12Down
Larval fat body12 10 of 4 0.40Down
Larval trachea2 20 of 4 0.09Down
Larval carcass3 00 of 4 0.11Down
S2 cells (growing)36 14 of 4 1.24None
Whole fly29 44 of 4

Looking for FBgn0052557. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime