Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0052570 through 18771 annotations produced 1 hits



CG32570 (TwdlY):

Annotation Number : CG32570
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052570
Gbrowse : chrX:16629105-16629849 (+) // 100.0 //
Probeset : 1637472_at
Accessions : protein= NP_728017;, nucleotide= NM_167540;
FlyMine data for FBgn0052570.
BioGrid reports that CG32570 interacts with CG4795 .
VDRC has 2 RNAi stocks for FBgn0052570 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain11 ± 12 of 4 0.50Down
Head12 ± 11 of 4 0.50Down
Eye9 ± 13 of 4 0.41Down
Thoracicoabdominal ganglion11 ± 12 of 4 0.50Down
Salivary gland23 ± 33 of 4 1.00None
Crop16 ± 23 of 4 0.70Down
Midgut21 ± 10 of 4 0.90None
Tubule10 ± 00 of 4 0.50Down
Hindgut10 ± 20 of 4 0.40Down
Heart9 ± 12 of 4 0.40Down
Fat body19 ± 34 of 4 0.84None
Ovary7 ± 11 of 4 0.30Down
Testis6 ± 01 of 4 0.30Down
Male accessory glands17 ± 10 of 4 0.70Down
Virgin spermatheca10 ± 23 of 4 0.45Down
Mated spermatheca9 ± 02 of 4 0.40Down
Adult carcass14 ± 30 of 4 0.60None
Larval CNS10 ± 13 of 4 0.44Down
Larval Salivary gland14 ± 14 of 4 0.63Down
Larval midgut20 ± 22 of 4 0.90None
Larval tubule8 ± 20 of 4 0.40Down
Larval hindgut12 ± 22 of 4 0.53Down
Larval fat body17 ± 12 of 4 0.80Down
Larval trachea9 ± 23 of 4 0.39Down
Larval carcass9 ± 01 of 4 0.39Down
S2 cells (growing)14 ± 24 of 4 0.62Down
Whole fly23 ± 12 of 4

Looking for FBgn0052570. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime