FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0052582 through 18771 annotations produced 1 hits

(CG32582):

Annotation Number : CG32582
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052582
Gbrowse : chrX:15730146-15730956 (+) // 96.98 //
Probeset : 1630797_at
Accessions : protein= NP_001096995; /// NP_727902;, nucleotide= NM_001103525; /// NM_167467;
FlyMine data for FBgn0052582.
BDGP gene expression has embryonic in situ data for CG32582: 4 pix of staining in 1 body parts.
VDRC has 1 RNAi stocks for FBgn0052582 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	11 ± 1	4 of 4	0.60	Down
Head	16 ± 1	3 of 4	0.90	None
Eye	21 ± 1	4 of 4	1.14	None
Thoracicoabdominal ganglion	13 ± 1	0 of 4	0.70	Down
Salivary gland	11 ± 4	0 of 4	0.60	None
Crop	31 ± 1	4 of 4	1.70	Up
Midgut	6 ± 2	0 of 4	0.30	Down
Tubule	6 ± 1	0 of 4	0.30	Down
Hindgut	11 ± 0	0 of 4	0.60	Down
Heart	14 ± 1	3 of 4	0.76	Down
Fat body	8 ± 5	0 of 4	0.43	Down
Ovary	4 ± 1	0 of 4	0.30	Down
Testis	304 ± 18	4 of 4	16.40	Up
Male accessory glands	8 ± 4	0 of 4	0.50	None
Virgin spermatheca	37 ± 0	4 of 4	2.00	Up
Mated spermatheca	56 ± 8	4 of 4	3.03	Up
Adult carcass	5 ± 2	0 of 4	0.30	Down
Larval CNS	11 ± 2	2 of 4	0.60	Down
Larval Salivary gland	7 ± 2	0 of 4	0.38	Down
Larval midgut	7 ± 2	0 of 4	0.42	Down
Larval tubule	13 ± 1	3 of 4	0.70	None
Larval hindgut	11 ± 0	1 of 4	0.63	Down
Larval fat body	42 ± 15	2 of 4	2.30	None
Larval trachea	14 ± 2	3 of 4	0.77	Down
Larval carcass	10 ± 2	1 of 4	0.58	Down
S2 cells (growing)	103 ± 4	4 of 4	5.61	Up
Whole fly	18 ± 1	4 of 4

Looking for FBgn0052582. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720