FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0052626 through 18771 annotations produced 4 hits

(CG32626):

Annotation Number : S.CX001525
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052626
Gbrowse : chrX:13737986-13739508 (-) // 100.0 //
Probeset : 1632081_s_at
Accessions : protein= NP_572931; /// NP_727739; /// NP_727740; /// NP_727741;, nucleotide= NM_132703; /// NM_167384; /// NM_167385; /// NM_167386;
Interpro : "0003876 // AMP deaminase activity // inferred from sequence or structural similarity /// 0003876 // AMP deaminase activ
FlyMine data for FBgn0052626.
BDGP gene expression has embryonic in situ data for CG32626: 36 pix of staining in 18 body parts.
TRiP has 2 RNAi stocks for FBgn0052626 available for purchase.
VDRC has 4 RNAi stocks for FBgn0052626 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	35 ± 3	4 of 4	1.10	None
Head	24 ± 3	3 of 4	0.80	None
Eye	13 ± 1	1 of 4	0.42	Down
Thoracicoabdominal ganglion	26 ± 2	4 of 4	0.80	None
Salivary gland	28 ± 4	1 of 4	0.88	None
Crop	81 ± 11	4 of 4	2.50	Up
Midgut	32 ± 4	4 of 4	1.00	None
Tubule	7 ± 1	1 of 4	0.20	Down
Hindgut	41 ± 1	4 of 4	1.30	None
Heart	2 ± 1	0 of 4	0.08	Down
Fat body	7 ± 10	0 of 4	0.22	Down
Ovary	39 ± 3	4 of 4	1.20	None
Testis	0 ± 0	0 of 4	0.00	Down
Male accessory glands	36 ± 6	4 of 4	1.10	None
Virgin spermatheca	0 ± 0	0 of 4	0.02	Down
Mated spermatheca	1 ± 0	0 of 4	0.04	Down
Adult carcass	21 ± 3	1 of 4	0.70	None
Larval CNS	12 ± 1	1 of 4	0.39	Down
Larval Salivary gland	16 ± 3	1 of 4	0.52	Down
Larval midgut	11 ± 2	0 of 4	0.34	Down
Larval tubule	90 ± 4	4 of 4	2.80	Up
Larval hindgut	30 ± 1	4 of 4	0.94	None
Larval fat body	13 ± 3	1 of 4	0.40	Down
Larval trachea	3 ± 2	0 of 4	0.11	Down
Larval carcass	20 ± 6	1 of 4	0.62	None
S2 cells (growing)	91 ± 6	4 of 4	2.81	Up
Whole fly	32 ± 4	4 of 4

(CG32626):

Annotation Number : CT30953
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052626
Gbrowse : chrX:13731635-13732118 (-) // 100.0 //
Probeset : 1636030_s_at
Accessions : protein= NP_572931; /// NP_727739; /// NP_727740; /// NP_727741;, nucleotide= NM_132703; /// NM_167384; /// NM_167385; /// NM_167386;
Interpro : "0003876 // AMP deaminase activity // inferred from sequence or structural similarity /// 0003876 // AMP deaminase activ
FlyMine data for FBgn0052626.
BDGP gene expression has embryonic in situ data for CG32626: 36 pix of staining in 18 body parts.
TRiP has 2 RNAi stocks for FBgn0052626 available for purchase.
VDRC has 4 RNAi stocks for FBgn0052626 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 1	0 of 4	0.50	None
Head	14 ± 3	3 of 4	1.90	None
Eye	4 ± 1	1 of 4	0.58	None
Thoracicoabdominal ganglion	4 ± 2	0 of 4	0.60	None
Salivary gland	14 ± 3	0 of 4	1.92	None
Crop	5 ± 0	0 of 4	0.80	None
Midgut	2 ± 0	0 of 4	0.40	Down
Tubule	3 ± 0	0 of 4	0.40	Down
Hindgut	7 ± 1	1 of 4	1.00	None
Heart	4 ± 1	1 of 4	0.61	None
Fat body	23 ± 7	4 of 4	3.26	Up
Ovary	1 ± 1	0 of 4	0.20	Down
Testis	2 ± 1	0 of 4	0.30	Down
Male accessory glands	11 ± 2	0 of 4	1.60	None
Virgin spermatheca	5 ± 0	0 of 4	0.77	None
Mated spermatheca	7 ± 1	0 of 4	0.99	None
Adult carcass	21 ± 3	1 of 4	2.90	Up
Larval CNS	3 ± 1	0 of 4	0.42	Down
Larval Salivary gland	6 ± 0	0 of 4	0.81	None
Larval midgut	3 ± 1	0 of 4	0.41	Down
Larval tubule	4 ± 1	0 of 4	0.70	None
Larval hindgut	2 ± 0	1 of 4	0.37	Down
Larval fat body	175 ± 19	4 of 4	23.90	Up
Larval trachea	1 ± 1	0 of 4	0.23	Down
Larval carcass	2 ± 1	0 of 4	0.33	Down
S2 cells (growing)	127 ± 4	4 of 4	17.28	Up
Whole fly	7 ± 0	1 of 4

(CG32626):

Annotation Number : CT36016
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052626
Gbrowse : chrX:13733563-13733803 (-) // 100.0 //
Probeset : 1631487_s_at
Accessions : protein= NP_572931; /// NP_727739; /// NP_727740; /// NP_727741;, nucleotide= NM_132703; /// NM_167384; /// NM_167385; /// NM_167386;
Interpro : "0003876 // AMP deaminase activity // inferred from sequence or structural similarity /// 0003876 // AMP deaminase activ
FlyMine data for FBgn0052626.
BDGP gene expression has embryonic in situ data for CG32626: 36 pix of staining in 18 body parts.
TRiP has 2 RNAi stocks for FBgn0052626 available for purchase.
VDRC has 4 RNAi stocks for FBgn0052626 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	8 ± 2	0 of 4	0.60	None
Head	8 ± 0	0 of 4	0.60	Down
Eye	6 ± 1	0 of 4	0.51	Down
Thoracicoabdominal ganglion	9 ± 1	0 of 4	0.70	None
Salivary gland	89 ± 2	4 of 4	6.77	Up
Crop	26 ± 2	2 of 4	2.00	Up
Midgut	14 ± 2	0 of 4	1.10	None
Tubule	21 ± 2	0 of 4	1.60	Up
Hindgut	50 ± 2	4 of 4	3.90	Up
Heart	10 ± 1	3 of 4	0.81	None
Fat body	7 ± 3	0 of 4	0.54	Down
Ovary	3 ± 1	0 of 4	0.30	Down
Testis	20 ± 2	4 of 4	1.60	Up
Male accessory glands	19 ± 1	1 of 4	1.50	None
Virgin spermatheca	12 ± 3	0 of 4	0.98	None
Mated spermatheca	16 ± 1	2 of 4	1.27	None
Adult carcass	26 ± 2	4 of 4	2.00	Up
Larval CNS	7 ± 3	0 of 4	0.59	None
Larval Salivary gland	6 ± 2	0 of 4	0.50	None
Larval midgut	11 ± 4	0 of 4	0.84	None
Larval tubule	42 ± 4	4 of 4	3.20	Up
Larval hindgut	32 ± 3	4 of 4	2.49	Up
Larval fat body	15 ± 4	1 of 4	1.20	None
Larval trachea	5 ± 1	0 of 4	0.44	Down
Larval carcass	39 ± 10	1 of 4	2.99	None
S2 cells (growing)	7 ± 1	0 of 4	0.54	Down
Whole fly	13 ± 1	2 of 4

(CG32626):

Annotation Number : CG32626
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052626
Gbrowse : chrX:13724781-13739863 (-) // 100.0 //
Probeset : 1640932_s_at
Accessions : protein= NP_572931; /// NP_727739; /// NP_727740; /// NP_727741;, nucleotide= NM_132703; /// NM_167384; /// NM_167385; /// NM_167386;
Interpro : "0003876 // AMP deaminase activity // inferred from sequence or structural similarity /// 0003876 // AMP deaminase activ
FlyMine data for FBgn0052626.
BDGP gene expression has embryonic in situ data for CG32626: 36 pix of staining in 18 body parts.
Homophila reports that CG32626 is a close match (0) to human gene AMPD3 (NP_001020561), a gene associated with [AMP deaminase deficiency, erythrocytic] (3).
BioGrid reports that CG32626 interacts with CG7425 CG8548 CG8620 CG8929 .
TRiP has 2 RNAi stocks for FBgn0052626 available for purchase.
VDRC has 4 RNAi stocks for FBgn0052626 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	592 ± 11	4 of 4	1.30	Up
Head	677 ± 29	4 of 4	1.50	Up
Eye	1063 ± 69	4 of 4	2.29	Up
Thoracicoabdominal ganglion	525 ± 11	4 of 4	1.10	Up
Salivary gland	1382 ± 62	4 of 4	2.98	Up
Crop	964 ± 10	4 of 4	2.10	Up
Midgut	673 ± 18	4 of 4	1.50	Up
Tubule	1069 ± 45	4 of 4	2.30	Up
Hindgut	1032 ± 26	4 of 4	2.20	Up
Heart	560 ± 31	4 of 4	1.21	Up
Fat body	564 ± 68	4 of 4	1.22	None
Ovary	407 ± 10	4 of 4	0.90	Down
Testis	337 ± 10	4 of 4	0.70	Down
Male accessory glands	524 ± 26	4 of 4	1.10	None
Virgin spermatheca	1264 ± 48	4 of 4	2.73	Up
Mated spermatheca	882 ± 6	4 of 4	1.90	Up
Adult carcass	628 ± 16	4 of 4	1.40	Up
Larval CNS	208 ± 10	4 of 4	0.45	Down
Larval Salivary gland	434 ± 14	4 of 4	0.94	None
Larval midgut	548 ± 64	4 of 4	1.18	None
Larval tubule	935 ± 27	4 of 4	2.00	Up
Larval hindgut	920 ± 90	4 of 4	1.98	Up
Larval fat body	1535 ± 111	4 of 4	3.30	Up
Larval trachea	157 ± 30	4 of 4	0.34	Down
Larval carcass	1108 ± 190	4 of 4	2.39	Up
S2 cells (growing)	784 ± 20	4 of 4	1.69	Up
Whole fly	464 ± 13	4 of 4

Looking for FBgn0052626. 4 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720