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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0052631 through 18771 annotations produced 1 hits



(CG32631):

Annotation Number : CG32631
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052631
Gbrowse : chrX:13450504-13451904 (+) // 100.0 //
Probeset : 1628122_at
Accessions : protein= NP_727714;, nucleotide= NM_167372;
FlyMine data for FBgn0052631.
BDGP gene expression has embryonic in situ data for CG32631: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0052631 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 1.00None
Head0 ± 00 of 4 0.80None
Eye0 ± 00 of 4 0.92None
Thoracicoabdominal ganglion0 ± 00 of 4 0.70None
Salivary gland3 ± 00 of 4 4.73Up
Crop0 ± 00 of 4 1.00None
Midgut0 ± 00 of 4 1.30None
Tubule0 ± 00 of 4 1.20None
Hindgut0 ± 00 of 4 1.10None
Heart0 ± 00 of 4 1.00None
Fat body0 ± 00 of 4 1.23None
Ovary0 ± 00 of 4 0.70None
Testis0 ± 00 of 4 0.70None
Male accessory glands0 ± 00 of 4 1.30None
Virgin spermatheca0 ± 00 of 4 1.35None
Mated spermatheca1 ± 00 of 4 1.46None
Adult carcass1 ± 00 of 4 2.30None
Larval CNS0 ± 00 of 4 0.50None
Larval Salivary gland0 ± 00 of 4 1.38None
Larval midgut0 ± 00 of 4 1.15None
Larval tubule1 ± 00 of 4 1.80None
Larval hindgut0 ± 00 of 4 1.15None
Larval fat body1 ± 00 of 4 1.90None
Larval trachea0 ± 00 of 4 1.19None
Larval carcass1 ± 00 of 4 1.77None
S2 cells (growing)0 ± 00 of 4 1.08None
Whole fly0 ± 00 of 4

Looking for FBgn0052631. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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