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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0052633 through 18771 annotations produced 1 hits



(CG32633):

Annotation Number : CG32633
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052633
Gbrowse : chrX:13455706-13457395 (+) // 100.0 //
Probeset : 1638523_at
Accessions : protein= NP_572898;, nucleotide= NM_132670;
FlyMine data for FBgn0052633.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.00Down
Head4 ± 12 of 4 0.10Down
Eye1 ± 00 of 4 0.02Down
Thoracicoabdominal ganglion5 ± 11 of 4 0.10Down
Salivary gland9 ± 10 of 4 0.13Down
Crop6 ± 01 of 4 0.10Down
Midgut980 ± 434 of 413.40Up
Tubule22 ± 83 of 4 0.30Down
Hindgut310 ± 174 of 4 4.30Up
Heart1 ± 10 of 4 0.02Down
Fat body4 ± 20 of 4 0.06Down
Ovary1 ± 00 of 4 0.00Down
Testis1 ± 10 of 4 0.00Down
Male accessory glands5 ± 20 of 4 0.10Down
Virgin spermatheca4 ± 10 of 4 0.05Down
Mated spermatheca4 ± 10 of 4 0.06Down
Adult carcass5 ± 20 of 4 0.10Down
Larval CNS1 ± 10 of 4 0.02Down
Larval Salivary gland4 ± 00 of 4 0.06Down
Larval midgut2585 ± 2424 of 435.46Up
Larval tubule20 ± 73 of 4 0.30Down
Larval hindgut739 ± 754 of 410.15Up
Larval fat body4 ± 00 of 4 0.10Down
Larval trachea2 ± 21 of 4 0.03Down
Larval carcass2 ± 10 of 4 0.03Down
S2 cells (growing)1 ± 00 of 4 0.01Down
Whole fly72 ± 104 of 4

Looking for FBgn0052633. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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