FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0052638 through 18771 annotations produced 1 hits

(CG32638):

Annotation Number : CG32638
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052638
Gbrowse : chrX:13017031-13022827 (-) // 100.0 //
Probeset : 1634787_at
Accessions : protein= NP_727668;, nucleotide= NM_167348;
FlyMine data for FBgn0052638.
BioGrid reports that CG32638 interacts with CG3642 CG9195 .
VDRC has 1 RNAi stocks for FBgn0052638 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	213 ± 8	4 of 4	1.60	Up
Head	246 ± 39	4 of 4	1.90	None
Eye	569 ± 14	4 of 4	4.32	Up
Thoracicoabdominal ganglion	157 ± 9	4 of 4	1.20	None
Salivary gland	1284 ± 52	4 of 4	9.74	Up
Crop	310 ± 12	4 of 4	2.40	Up
Midgut	240 ± 4	4 of 4	1.80	Up
Tubule	136 ± 3	4 of 4	1.00	None
Hindgut	460 ± 8	4 of 4	3.50	Up
Heart	279 ± 10	4 of 4	2.12	Up
Fat body	125 ± 25	4 of 4	0.95	None
Ovary	107 ± 6	4 of 4	0.80	None
Testis	148 ± 7	4 of 4	1.10	None
Male accessory glands	137 ± 9	4 of 4	1.00	None
Virgin spermatheca	48 ± 2	4 of 4	0.37	Down
Mated spermatheca	54 ± 3	4 of 4	0.41	Down
Adult carcass	179 ± 16	4 of 4	1.40	None
Larval CNS	105 ± 13	4 of 4	0.80	None
Larval Salivary gland	481 ± 40	4 of 4	3.65	Up
Larval midgut	231 ± 16	4 of 4	1.75	Up
Larval tubule	552 ± 15	4 of 4	4.20	Up
Larval hindgut	458 ± 17	4 of 4	3.47	Up
Larval fat body	95 ± 4	4 of 4	0.70	Down
Larval trachea	292 ± 35	4 of 4	2.22	Up
Larval carcass	273 ± 14	4 of 4	2.07	Up
S2 cells (growing)	542 ± 13	4 of 4	4.12	Up
Whole fly	131 ± 9	4 of 4

Looking for FBgn0052638. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720