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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0052666 through 18771 annotations produced 1 hits



Death-associated protein kinase related (Drak):

Annotation Number : CG32666
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052666
Gbrowse : chrX:11387202-11449079 (+) // 100.0 //
Probeset : 1629741_at
Accessions : protein= NP_001162723; /// NP_001162724; /// NP_727533; /// NP_996411;, nucleotide= NM_001169252; /// NM_001169253; /// NM_167288; /// NM_206688;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred
FlyMine data for FBgn0052666.
BDGP gene expression has embryonic in situ data for CG32666: 4 pix of staining in 1 body parts.
Homophila reports that CG32666 is a close match (4e-11) to human gene LKB1;PJS;STK11 (NP_000446), a gene associated with Melanoma, malignant sporadic (3);Pancreatic cancer, sporadic (3);Peutz-Jeghers syndrome, 175200 (3);Testicular tumor, sporadic, 273300 (3).
TRiP has 2 RNAi stocks for FBgn0052666 available for purchase.
VDRC has 4 RNAi stocks for FBgn0052666 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain64 24 of 4 1.50Up
Head32 14 of 4 0.80None
Eye52 64 of 4 1.27None
Thoracicoabdominal ganglion45 24 of 4 1.10None
Salivary gland68 33 of 4 1.65Up
Crop25 24 of 4 0.60Down
Midgut36 34 of 4 0.90None
Tubule50 34 of 4 1.20Up
Hindgut41 14 of 4 1.00None
Heart42 34 of 4 1.01None
Fat body121 154 of 4 2.93Up
Ovary69 24 of 4 1.70Up
Testis8 12 of 4 0.20Down
Male accessory glands31 04 of 4 0.80None
Virgin spermatheca69 54 of 4 1.66Up
Mated spermatheca50 14 of 4 1.22None
Adult carcass40 34 of 4 1.00None
Larval CNS68 94 of 4 1.64Up
Larval Salivary gland35 44 of 4 0.86None
Larval midgut44 44 of 4 1.07None
Larval tubule30 14 of 4 0.70None
Larval hindgut44 24 of 4 1.06None
Larval fat body33 14 of 4 0.80None
Larval trachea29 44 of 4 0.70Down
Larval carcass32 24 of 4 0.78None
S2 cells (growing)34 34 of 4 0.82None
Whole fly41 44 of 4

Looking for FBgn0052666. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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