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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0052667 through 18771 annotations produced 1 hits



(CG32667):

Annotation Number : CG32667
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052667
Gbrowse : chrX:11033789-11034296 (-) // 100.0 //
Probeset : 1634697_at
Accessions : protein= NP_727495;, nucleotide= NM_167271;
FlyMine data for FBgn0052667.
VDRC has 5 RNAi stocks for FBgn0052667 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain113 ± 34 of 4 0.20Down
Head1469 ± 1464 of 4 2.80Up
Eye1078 ± 2744 of 4 2.03None
Thoracicoabdominal ganglion115 ± 44 of 4 0.20Down
Salivary gland24 ± 83 of 4 0.05Down
Crop102 ± 74 of 4 0.20Down
Midgut64 ± 114 of 4 0.10Down
Tubule71 ± 203 of 4 0.10Down
Hindgut206 ± 74 of 4 0.40Down
Heart2904 ± 1754 of 4 5.47Up
Fat body3735 ± 2554 of 4 7.03Up
Ovary4 ± 10 of 4 0.00Down
Testis9 ± 42 of 4 0.00Down
Male accessory glands5637 ± 654 of 410.60Up
Virgin spermatheca3596 ± 1564 of 4 6.77Up
Mated spermatheca3288 ± 1424 of 4 6.19Up
Adult carcass2122 ± 804 of 4 4.00Up
Larval CNS12 ± 53 of 4 0.02Down
Larval Salivary gland84 ± 124 of 4 0.16Down
Larval midgut9 ± 30 of 4 0.02Down
Larval tubule5 ± 10 of 4 0.00Down
Larval hindgut87 ± 194 of 4 0.16Down
Larval fat body446 ± 1064 of 4 0.80None
Larval trachea98 ± 914 of 4 0.19Down
Larval carcass42 ± 114 of 4 0.08Down
S2 cells (growing)8 ± 00 of 4 0.02Down
Whole fly531 ± 984 of 4

Looking for FBgn0052667. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime