Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0052698 through 18771 annotations produced 1 hits



(CG32698):

Annotation Number : CG32698
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052698
Gbrowse : chrX:9682514-9743263 (+) // 100.0 //
Probeset : 1628885_at
Accessions : protein= NP_572581;, nucleotide= NM_132353;
Pathway : 0005576 // extracellular region // inferred from electronic annotation
Interpro : 0004089 // carbonate dehydratase activity // inferred from sequence or structural similarity /// 0004089 // carbonate de
FlyMine data for FBgn0052698.
Homophila reports that CG32698 is a close match (3e-16) to human gene CA4;RP17 (NP_000708), a gene associated with Retinitis pigmentosa-17, 600852 (3).
BioGrid reports that CG32698 interacts with CG3725 .
VDRC has 6 RNAi stocks for FBgn0052698 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain16 ± 02 of 4 0.50Down
Head67 ± 64 of 4 2.20Up
Eye47 ± 74 of 4 1.54None
Thoracicoabdominal ganglion12 ± 10 of 4 0.40Down
Salivary gland4 ± 10 of 4 0.16Down
Crop2 ± 10 of 4 0.10Down
Midgut8 ± 00 of 4 0.30Down
Tubule7 ± 00 of 4 0.20Down
Hindgut8 ± 10 of 4 0.30Down
Heart107 ± 34 of 4 3.47Up
Fat body243 ± 164 of 4 7.89Up
Ovary6 ± 10 of 4 0.20Down
Testis1 ± 00 of 4 0.00Down
Male accessory glands3 ± 00 of 4 0.10Down
Virgin spermatheca103 ± 94 of 4 3.34Up
Mated spermatheca166 ± 54 of 4 5.40Up
Adult carcass107 ± 124 of 4 3.50Up
Larval CNS6 ± 20 of 4 0.22Down
Larval Salivary gland28 ± 24 of 4 0.92None
Larval midgut9 ± 10 of 4 0.30Down
Larval tubule2 ± 00 of 4 0.10Down
Larval hindgut14 ± 20 of 4 0.47Down
Larval fat body988 ± 1254 of 432.00Up
Larval trachea12 ± 32 of 4 0.40Down
Larval carcass4 ± 20 of 4 0.14Down
S2 cells (growing)1 ± 00 of 4 0.03Down
Whole fly30 ± 24 of 4

Looking for FBgn0052698. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime