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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0052720 through 18771 annotations produced 1 hits



(CG32720):

Annotation Number : CG32720
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052720
Gbrowse : chrX:7426896-7430922 (-) // 100.0 //
Probeset : 1633509_at
Accessions : protein= NP_727191;, nucleotide= NM_167129;
FlyMine data for FBgn0052720.
VDRC has 1 RNAi stocks for FBgn0052720 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 0.40None
Head1 ± 00 of 4 0.70None
Eye1 ± 00 of 4 0.63None
Thoracicoabdominal ganglion1 ± 00 of 4 0.70None
Salivary gland6 ± 30 of 4 3.48None
Crop0 ± 00 of 4 0.50None
Midgut1 ± 00 of 4 0.80None
Tubule2 ± 00 of 4 1.10None
Hindgut0 ± 00 of 4 0.40None
Heart0 ± 00 of 4 0.51None
Fat body1 ± 00 of 4 0.73None
Ovary1 ± 00 of 4 0.60None
Testis1 ± 00 of 4 1.00None
Male accessory glands1 ± 00 of 4 0.80None
Virgin spermatheca1 ± 00 of 4 0.76None
Mated spermatheca1 ± 00 of 4 1.01None
Adult carcass1 ± 00 of 4 0.80None
Larval CNS0 ± 00 of 4 0.31None
Larval Salivary gland1 ± 00 of 4 0.73None
Larval midgut0 ± 00 of 4 0.45None
Larval tubule2 ± 10 of 4 1.30None
Larval hindgut0 ± 00 of 4 0.28None
Larval fat body1 ± 00 of 4 1.10None
Larval trachea0 ± 00 of 4 0.54None
Larval carcass1 ± 00 of 4 0.56None
S2 cells (growing)1 ± 00 of 4 0.66None
Whole fly1 ± 00 of 4

Looking for FBgn0052720. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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