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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0052733 through 18771 annotations produced 1 hits



/// (CG32733 /// CG32797):

Annotation Number : CG32797
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052733 /// FBgn0052797
Gbrowse : chrX:2319129-2319738 (-) // 100.0 //
Probeset : 1638597_s_at
Accessions : protein= NP_726810; /// NP_727143;, nucleotide= NM_166939; /// NM_167099;
FlyMine data for FBgn0052733 /// FBgn0052797.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain15 ± 13 of 4 2.40Up
Head7 ± 10 of 4 1.20None
Eye3 ± 10 of 4 0.57None
Thoracicoabdominal ganglion9 ± 10 of 4 1.50None
Salivary gland22 ± 10 of 4 3.56Up
Crop7 ± 10 of 4 1.20None
Midgut8 ± 30 of 4 1.30None
Tubule5 ± 00 of 4 0.90None
Hindgut5 ± 20 of 4 0.90None
Heart3 ± 10 of 4 0.61None
Fat body27 ± 81 of 4 4.41Up
Ovary6 ± 00 of 4 1.10None
Testis22 ± 14 of 4 3.70Up
Male accessory glands8 ± 30 of 4 1.30None
Virgin spermatheca26 ± 24 of 4 4.25Up
Mated spermatheca29 ± 63 of 4 4.65Up
Adult carcass11 ± 40 of 4 1.90None
Larval CNS10 ± 32 of 4 1.70None
Larval Salivary gland9 ± 21 of 4 1.56None
Larval midgut7 ± 20 of 4 1.14None
Larval tubule8 ± 10 of 4 1.30None
Larval hindgut8 ± 10 of 4 1.42None
Larval fat body7 ± 11 of 4 1.20None
Larval trachea6 ± 31 of 4 1.02None
Larval carcass11 ± 10 of 4 1.86Up
S2 cells (growing)5 ± 10 of 4 0.82None
Whole fly6 ± 10 of 4

Looking for FBgn0052733. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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