Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0052751 through 18771 annotations produced 1 hits



(CG32751):

Annotation Number : CG32751
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052751
Gbrowse : chrX:6090756-6092662 (-) // 100.0 //
Probeset : 1630310_at
Accessions : protein= NP_727068;, nucleotide= NM_167061;
Pathway : 0019898 // extrinsic to membrane // inferred from sequence or structural similarity
Interpro : "0016787 // hydrolase activity // inferred from sequence or structural similarity /// 0016787 // hydrolase activity // i
FlyMine data for FBgn0052751.
Homophila reports that CG32751 is a close match (4e-29) to human gene HDLCQ8;VNN1 (NP_004657), a gene associated with [High density lipoprotein cholesterol level QTL 8] (3).
VDRC has 1 RNAi stocks for FBgn0052751 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 0.00Down
Head1 ± 00 of 4 0.10Down
Eye0 ± 00 of 4 0.04Down
Thoracicoabdominal ganglion0 ± 00 of 4 0.10Down
Salivary gland8 ± 30 of 4 0.52None
Crop0 ± 00 of 4 0.00Down
Midgut133 ± 484 of 4 8.50None
Tubule2 ± 00 of 4 0.20Down
Hindgut1 ± 10 of 4 0.10Down
Heart0 ± 00 of 4 0.05Down
Fat body2 ± 10 of 4 0.13Down
Ovary0 ± 00 of 4 0.00Down
Testis0 ± 00 of 4 0.00Down
Male accessory glands1 ± 00 of 4 0.10Down
Virgin spermatheca731 ± 394 of 446.38Up
Mated spermatheca591 ± 444 of 437.48Up
Adult carcass2 ± 00 of 4 0.10Down
Larval CNS2 ± 30 of 4 0.15Down
Larval Salivary gland1 ± 10 of 4 0.12Down
Larval midgut685 ± 1414 of 443.46Up
Larval tubule2 ± 00 of 4 0.20Down
Larval hindgut31 ± 44 of 4 2.01Up
Larval fat body4 ± 10 of 4 0.30Down
Larval trachea0 ± 00 of 4 0.03Down
Larval carcass2 ± 00 of 4 0.15Down
S2 cells (growing)0 ± 00 of 4 0.04Down
Whole fly15 ± 23 of 4

Looking for FBgn0052751. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime