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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0052755 through 18771 annotations produced 1 hits



(CG32755):

Annotation Number : CG32755
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052755
Gbrowse : chrX:5844283-5845470 (+) // 100.0 //
Probeset : 1632474_at
Accessions : protein= NP_727055;, nucleotide= NM_167056;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity /
FlyMine data for FBgn0052755.
Homophila reports that CG32755 is a close match (2e-12) to human gene MASP2 (NP_006601), a gene associated with MASP2 deficiency (3).
VDRC has 3 RNAi stocks for FBgn0052755 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain18 24 of 4 2.00Up
Head2 10 of 4 0.30Down
Eye2 10 of 4 0.30Down
Thoracicoabdominal ganglion16 24 of 4 1.70None
Salivary gland6 20 of 4 0.72None
Crop0 00 of 4 0.10Down
Midgut10 20 of 4 1.10None
Tubule7 00 of 4 0.80Down
Hindgut9 20 of 4 1.00None
Heart3 11 of 4 0.39Down
Fat body5 40 of 4 0.58None
Ovary1 00 of 4 0.20Down
Testis49 14 of 4 5.20Up
Male accessory glands3 10 of 4 0.30Down
Virgin spermatheca3 10 of 4 0.39Down
Mated spermatheca7 12 of 4 0.75None
Adult carcass4 10 of 4 0.50None
Larval CNS4 10 of 4 0.50Down
Larval Salivary gland2 10 of 4 0.25Down
Larval midgut10 40 of 4 1.12None
Larval tubule9 00 of 4 1.00None
Larval hindgut9 20 of 4 0.96None
Larval fat body13 51 of 4 1.40None
Larval trachea1 10 of 4 0.16Down
Larval carcass0 00 of 4 0.09Down
S2 cells (growing)3 10 of 4 0.41Down
Whole fly9 10 of 4

Looking for FBgn0052755. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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