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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0052803 through 18771 annotations produced 1 hits


Annotation Number : CG32803
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052803
Gbrowse : chrX:1794725-1795971 (-) // 99.42 //
Probeset : 1623076_at
Accessions : protein= NP_001033822; /// NP_569957;, nucleotide= NM_001038733; /// NM_130601;
FlyMine data for FBgn0052803.
BioGrid reports that CG32803 interacts with CG4770 CG9426 .
VDRC has 1 RNAi stocks for FBgn0052803 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain71 24 of 4 0.50Down
Head103 74 of 4 0.80None
Eye112 94 of 4 0.86None
Thoracicoabdominal ganglion86 24 of 4 0.70Down
Salivary gland233 34 of 4 1.78Up
Crop215 74 of 4 1.60Up
Midgut118 24 of 4 0.90None
Tubule141 84 of 4 1.10None
Hindgut141 44 of 4 1.10None
Heart145 54 of 4 1.11None
Fat body119 154 of 4 0.91None
Ovary189 04 of 4 1.50Up
Testis140 24 of 4 1.10None
Male accessory glands176 74 of 4 1.30Up
Virgin spermatheca120 24 of 4 0.92None
Mated spermatheca111 64 of 4 0.85None
Adult carcass128 14 of 4 1.00None
Larval CNS165 134 of 4 1.27None
Larval Salivary gland160 54 of 4 1.23None
Larval midgut170 34 of 4 1.30Up
Larval tubule245 74 of 4 1.90Up
Larval hindgut115 54 of 4 0.89None
Larval fat body1062 1784 of 4 8.10Up
Larval trachea138 54 of 4 1.06None
Larval carcass199 184 of 4 1.53Up
S2 cells (growing)240 34 of 4 1.84Up
Whole fly130 124 of 4

Looking for FBgn0052803. 1 entries matched from 18771, in 2 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime