Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0052816 through 18771 annotations produced 1 hits



(CG32816):

Annotation Number : CG32816
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052816
Gbrowse : chrX:211053-228832 (-) // 100.0 //
Probeset : 1623949_s_at
Accessions : protein= NP_001138139; /// NP_001138140; /// NP_726662; /// NP_726663;, nucleotide= NM_001144667; /// NM_001144668; /// NM_166838; /// NM_166839;
FlyMine data for FBgn0052816.
BDGP gene expression has embryonic in situ data for CG32816: 4 pix of staining in 2 body parts.
VDRC has 2 RNAi stocks for FBgn0052816 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 00 of 4 0.30Down
Head10 24 of 4 0.90None
Eye31 24 of 4 2.72Up
Thoracicoabdominal ganglion1 00 of 4 0.10Down
Salivary gland21 22 of 4 1.85Up
Crop15 14 of 4 1.40None
Midgut3 10 of 4 0.30Down
Tubule4 10 of 4 0.40Down
Hindgut19 24 of 4 1.70Up
Heart3 10 of 4 0.28Down
Fat body5 12 of 4 0.49Down
Ovary18 04 of 4 1.60Up
Testis3 00 of 4 0.30Down
Male accessory glands42 74 of 4 3.60Up
Virgin spermatheca15 14 of 4 1.30None
Mated spermatheca14 14 of 4 1.28None
Adult carcass8 10 of 4 0.70None
Larval CNS4 10 of 4 0.37Down
Larval Salivary gland10 21 of 4 0.94None
Larval midgut3 01 of 4 0.27Down
Larval tubule5 11 of 4 0.50Down
Larval hindgut4 11 of 4 0.35Down
Larval fat body10 10 of 4 0.90None
Larval trachea361 824 of 430.99Up
Larval carcass20 44 of 4 1.74None
S2 cells (growing)22 14 of 4 1.90Up
Whole fly11 04 of 4

Looking for FBgn0052816. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime