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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0052855 through 18771 annotations produced 1 hits



(CG32855):

Annotation Number : CG32855
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0052855
Gbrowse : chr3R:11904848-11906720 (-) // 100.0 //
Probeset : 1627541_at
Accessions : protein= NP_732112;, nucleotide= NM_169704;
FlyMine data for FBgn0052855.
VDRC has 1 RNAi stocks for FBgn0052855 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 00 of 4 0.50None
Head3 ± 10 of 4 0.80None
Eye8 ± 12 of 4 1.97None
Thoracicoabdominal ganglion4 ± 10 of 4 1.00None
Salivary gland11 ± 40 of 4 2.57None
Crop1 ± 00 of 4 0.30None
Midgut0 ± 00 of 4 0.20None
Tubule1 ± 00 of 4 0.40Down
Hindgut2 ± 00 of 4 0.40None
Heart1 ± 00 of 4 0.42None
Fat body6 ± 40 of 4 1.43None
Ovary1 ± 00 of 4 0.40None
Testis1 ± 00 of 4 0.30None
Male accessory glands6 ± 30 of 4 1.50None
Virgin spermatheca1 ± 00 of 4 0.43None
Mated spermatheca3 ± 20 of 4 0.74None
Adult carcass5 ± 20 of 4 1.20None
Larval CNS3 ± 10 of 4 0.85None
Larval Salivary gland8 ± 13 of 4 1.85None
Larval midgut4 ± 10 of 4 0.97None
Larval tubule4 ± 10 of 4 0.90None
Larval hindgut10 ± 22 of 4 2.47None
Larval fat body5 ± 00 of 4 1.30None
Larval trachea28 ± 44 of 4 6.56Up
Larval carcass3 ± 10 of 4 0.74None
S2 cells (growing)3 ± 20 of 4 0.79None
Whole fly4 ± 21 of 4

Looking for FBgn0052855. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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