FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0052865 through 18771 annotations produced 1 hits

():

Annotation Number : Transposon.81
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID :
Gbrowse :
Probeset : 1634187_x_at
Accessions : protein= NR_002020;, nucleotide=

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	63 ± 3	4 of 4	1.50	None
Head	36 ± 9	4 of 4	0.90	None
Eye	36 ± 2	4 of 4	0.87	None
Thoracicoabdominal ganglion	54 ± 4	4 of 4	1.30	None
Salivary gland	164 ± 10	4 of 4	3.90	Up
Crop	60 ± 8	4 of 4	1.40	None
Midgut	57 ± 10	4 of 4	1.40	None
Tubule	360 ± 63	4 of 4	8.60	Up
Hindgut	68 ± 6	4 of 4	1.60	None
Heart	3353 ± 152	4 of 4	79.66	Up
Fat body	442 ± 159	4 of 4	10.52	Up
Ovary	5 ± 0	4 of 4	0.10	Down
Testis	15 ± 1	4 of 4	0.40	Down
Male accessory glands	78 ± 17	4 of 4	1.90	None
Virgin spermatheca	56 ± 7	4 of 4	1.33	None
Mated spermatheca	217 ± 89	4 of 4	5.17	None
Adult carcass	227 ± 20	4 of 4	5.40	Up
Larval CNS	754 ± 110	4 of 4	17.91	Up
Larval Salivary gland	339 ± 60	4 of 4	8.07	Up
Larval midgut	386 ± 12	4 of 4	9.18	Up
Larval tubule	276 ± 13	4 of 4	6.60	Up
Larval hindgut	56 ± 10	4 of 4	1.34	None
Larval fat body	159 ± 44	4 of 4	3.80	None
Larval trachea	181 ± 279	4 of 4	4.30	None
Larval carcass	468 ± 42	4 of 4	11.13	Up
S2 cells (growing)	404 ± 17	4 of 4	9.61	Up
Whole fly	42 ± 8	4 of 4

Looking for FBgn0052865. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720