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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0053012 through 18771 annotations produced 1 hits



(CG33012):

Annotation Number : CG33012
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0053012
Gbrowse : chr2R:8254902-8258338 (+) // 100.0 //
Probeset : 1638879_a_at
Accessions : protein= NP_788334; /// NP_788335;, nucleotide= NM_176154; /// NM_176155;
Interpro : 0008233 // peptidase activity // inferred from electronic annotation
FlyMine data for FBgn0053012.
VDRC has 2 RNAi stocks for FBgn0053012 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 0.00Down
Head1 ± 00 of 4 0.00Down
Eye0 ± 00 of 4 0.02Down
Thoracicoabdominal ganglion1 ± 00 of 4 0.10Down
Salivary gland3 ± 00 of 4 0.12Down
Crop1 ± 00 of 4 0.10Down
Midgut9 ± 30 of 4 0.40Down
Tubule526 ± 594 of 420.70Up
Hindgut327 ± 404 of 412.90Up
Heart0 ± 00 of 4 0.03Down
Fat body2 ± 10 of 4 0.10Down
Ovary1 ± 00 of 4 0.00Down
Testis1 ± 00 of 4 0.10Down
Male accessory glands1 ± 00 of 4 0.10Down
Virgin spermatheca2 ± 00 of 4 0.08Down
Mated spermatheca1 ± 00 of 4 0.06Down
Adult carcass4 ± 20 of 4 0.20Down
Larval CNS0 ± 00 of 4 0.03Down
Larval Salivary gland1 ± 00 of 4 0.05Down
Larval midgut273 ± 94 of 410.75Up
Larval tubule1308 ± 474 of 451.30Up
Larval hindgut729 ± 504 of 428.63Up
Larval fat body1 ± 00 of 4 0.10Down
Larval trachea0 ± 00 of 4 0.04Down
Larval carcass2 ± 10 of 4 0.10Down
S2 cells (growing)1 ± 00 of 4 0.04Down
Whole fly25 ± 10 of 4

Looking for FBgn0053012. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime