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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0053095 through 18771 annotations produced 1 hits



(CG33095):

Annotation Number : CG33095
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0053095
Gbrowse : chr3R:20925713-20927870 (+) // 100.0 //
Probeset : 1635429_at
Accessions : protein= NP_001027210; /// NP_788738;, nucleotide= NM_001032039; /// NM_176561;
FlyMine data for FBgn0053095.
BDGP gene expression has embryonic in situ data for CG33095: 4 pix of staining in 1 body parts.
BioGrid reports that CG33095 interacts with CG33275 .
TRiP has 1 RNAi stocks for FBgn0053095 available for purchase.
VDRC has 2 RNAi stocks for FBgn0053095 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain195 ± 54 of 4 0.80Down
Head129 ± 74 of 4 0.50Down
Eye64 ± 14 of 4 0.25Down
Thoracicoabdominal ganglion148 ± 44 of 4 0.60Down
Salivary gland168 ± 94 of 4 0.65Down
Crop152 ± 64 of 4 0.60Down
Midgut119 ± 34 of 4 0.50Down
Tubule85 ± 24 of 4 0.30Down
Hindgut115 ± 54 of 4 0.40Down
Heart99 ± 74 of 4 0.38Down
Fat body186 ± 84 of 4 0.72Down
Ovary649 ± 124 of 4 2.50Up
Testis350 ± 84 of 4 1.30Up
Male accessory glands239 ± 44 of 4 0.90None
Virgin spermatheca238 ± 174 of 4 0.92None
Mated spermatheca212 ± 94 of 4 0.82None
Adult carcass103 ± 44 of 4 0.40Down
Larval CNS519 ± 424 of 4 2.00Up
Larval Salivary gland405 ± 114 of 4 1.56Up
Larval midgut312 ± 554 of 4 1.20None
Larval tubule324 ± 224 of 4 1.30None
Larval hindgut313 ± 244 of 4 1.21None
Larval fat body510 ± 94 of 4 2.00Up
Larval trachea269 ± 144 of 4 1.04None
Larval carcass258 ± 94 of 4 1.00None
S2 cells (growing)305 ± 64 of 4 1.18None
Whole fly259 ± 174 of 4

Looking for FBgn0053095. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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