FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0053098 through 18771 annotations produced 2 hits

(CG33098):

Annotation Number : CG33098
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0053098
Gbrowse : chr3R:8213286-8214307 (+) // 100.0 //
Probeset : 1640536_at
Accessions : protein= NP_788657; /// NP_788658; /// NP_788659;, nucleotide= NM_176480; /// NM_176481; /// NM_176482;
Pathway : 0016460 // myosin II complex // inferred from sequence or structural similarity
Interpro : 0005509 // calcium ion binding // inferred from electronic annotation
FlyMine data for FBgn0053098.
BDGP gene expression has embryonic in situ data for CG33098: 6 pix of staining in 1 body parts.
Homophila reports that CG33098 is a close match (2e-12) to human gene CMH10;MYL2 (NP_000423), a gene associated with Cardiomyopathy, familial hypertrophic, 10, 608758 (3);Cardiomyopathy, hypertrophic, mid-left ventricular chamber type, 608758 (3).
VDRC has 3 RNAi stocks for FBgn0053098 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	1.00	None
Head	2 ± 0	0 of 4	1.50	None
Eye	0 ± 0	0 of 4	0.19	Down
Thoracicoabdominal ganglion	4 ± 1	0 of 4	2.40	None
Salivary gland	14 ± 3	0 of 4	7.48	Up
Crop	3 ± 1	1 of 4	1.60	None
Midgut	3 ± 0	0 of 4	1.60	None
Tubule	3 ± 0	0 of 4	1.80	None
Hindgut	6 ± 1	0 of 4	3.10	Up
Heart	0 ± 0	0 of 4	0.32	Down
Fat body	3 ± 2	1 of 4	1.84	None
Ovary	2 ± 1	0 of 4	1.40	None
Testis	22 ± 1	4 of 4	11.50	Up
Male accessory glands	9 ± 0	0 of 4	4.60	Up
Virgin spermatheca	3 ± 1	0 of 4	1.96	None
Mated spermatheca	4 ± 1	0 of 4	2.10	None
Adult carcass	3 ± 1	0 of 4	1.90	None
Larval CNS	5 ± 1	0 of 4	2.75	Up
Larval Salivary gland	2 ± 1	0 of 4	1.35	None
Larval midgut	1 ± 0	0 of 4	0.63	None
Larval tubule	4 ± 1	0 of 4	2.50	None
Larval hindgut	3 ± 1	0 of 4	1.58	None
Larval fat body	7 ± 3	1 of 4	3.60	None
Larval trachea	1 ± 0	0 of 4	0.71	None
Larval carcass	5 ± 0	0 of 4	2.97	Up
S2 cells (growing)	3 ± 1	0 of 4	1.76	None
Whole fly	2 ± 0	0 of 4

(CG33098):

Annotation Number : CG33098
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0053098
Gbrowse : chr3R:8213286-8214307 (+) // 100.0 //
Probeset : 1641228_a_at
Accessions : protein= NP_788657; /// NP_788658; /// NP_788659;, nucleotide= NM_176480; /// NM_176481; /// NM_176482;
Pathway : 0016460 // myosin II complex // inferred from sequence or structural similarity
Interpro : 0005509 // calcium ion binding // inferred from electronic annotation
FlyMine data for FBgn0053098.
BDGP gene expression has embryonic in situ data for CG33098: 6 pix of staining in 1 body parts.
Homophila reports that CG33098 is a close match (2e-12) to human gene CMH10;MYL2 (NP_000423), a gene associated with Cardiomyopathy, familial hypertrophic, 10, 608758 (3);Cardiomyopathy, hypertrophic, mid-left ventricular chamber type, 608758 (3).
VDRC has 3 RNAi stocks for FBgn0053098 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	6 ± 2	0 of 4	0.20	Down
Head	13 ± 3	0 of 4	0.40	Down
Eye	9 ± 1	0 of 4	0.32	Down
Thoracicoabdominal ganglion	8 ± 2	0 of 4	0.30	Down
Salivary gland	12 ± 3	0 of 4	0.39	Down
Crop	3 ± 1	0 of 4	0.10	Down
Midgut	11 ± 4	0 of 4	0.40	Down
Tubule	6 ± 1	0 of 4	0.20	Down
Hindgut	5 ± 1	0 of 4	0.20	Down
Heart	2 ± 1	0 of 4	0.09	Down
Fat body	7 ± 2	0 of 4	0.23	Down
Ovary	4 ± 1	0 of 4	0.20	Down
Testis	58 ± 4	4 of 4	1.90	Up
Male accessory glands	8 ± 3	0 of 4	0.30	Down
Virgin spermatheca	4 ± 1	0 of 4	0.16	Down
Mated spermatheca	4 ± 2	0 of 4	0.14	Down
Adult carcass	83 ± 6	4 of 4	2.70	Up
Larval CNS	5 ± 2	0 of 4	0.18	Down
Larval Salivary gland	5 ± 3	0 of 4	0.16	Down
Larval midgut	6 ± 2	0 of 4	0.20	Down
Larval tubule	7 ± 2	0 of 4	0.20	Down
Larval hindgut	2 ± 1	0 of 4	0.08	Down
Larval fat body	14 ± 6	0 of 4	0.50	None
Larval trachea	4 ± 1	0 of 4	0.16	Down
Larval carcass	10 ± 2	0 of 4	0.33	Down
S2 cells (growing)	4 ± 1	0 of 4	0.15	Down
Whole fly	31 ± 1	4 of 4

Looking for FBgn0053098. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720