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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0053137 through 18771 annotations produced 1 hits


Annotation Number : CG33137
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0053137
Gbrowse : chr2R:9062958-9063580 (+) // 100.0 //
Probeset : 1638148_at
Accessions : protein= NP_788343;, nucleotide= NM_176163;
FlyMine data for FBgn0053137.
VDRC has 1 RNAi stocks for FBgn0053137 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain7 13 of 4 5.80Up
Head6 00 of 4 5.20Up
Eye6 10 of 4 5.51Up
Thoracicoabdominal ganglion11 14 of 4 9.50Up
Salivary gland20 50 of 416.37Up
Crop19 12 of 415.50Up
Midgut6 10 of 4 5.00None
Tubule5 00 of 4 4.80Up
Hindgut10 11 of 4 8.30Up
Heart8 13 of 4 6.73Up
Fat body14 13 of 411.51Up
Ovary1 00 of 4 1.30None
Testis3 10 of 4 2.50None
Male accessory glands5 20 of 4 4.30None
Virgin spermatheca18 13 of 414.98Up
Mated spermatheca11 11 of 4 9.04Up
Adult carcass7 20 of 4 6.30None
Larval CNS7 12 of 4 5.82Up
Larval Salivary gland14 21 of 411.63Up
Larval midgut7 10 of 4 6.22Up
Larval tubule5 00 of 4 4.30Up
Larval hindgut9 11 of 4 7.47Up
Larval fat body6 21 of 4 4.90None
Larval trachea3 20 of 4 2.73None
Larval carcass10 02 of 4 8.82Up
S2 cells (growing)8 01 of 4 6.61Up
Whole fly1 00 of 4

Looking for FBgn0053137. 1 entries matched from 18771, in 3 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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