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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0053138 through 18771 annotations produced 1 hits



/// (CG33138 /// DsecCG33138):

Annotation Number : CG33138
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0053138
Gbrowse : chr2R:9058905-9062301 (+) // 99.83 //
Probeset : 1634374_at
Accessions : protein= NP_788342;, nucleotide= NM_176162;
Interpro : "0003824 // catalytic activity // inferred from electronic annotation /// 0003844 // 1
FlyMine data for FBgn0053138.
BDGP gene expression has embryonic in situ data for CG33138: 18 pix of staining in 7 body parts.
Homophila reports that CG33138 is a close match (0) to human gene GBE1 (NP_000149), a gene associated with Glycogen storage disease IV, 232500 (3).
BioGrid reports that CG33138 interacts with CG4216 CG7109 CG9306 .
TRiP has 2 RNAi stocks for FBgn0053138 available for purchase.
VDRC has 2 RNAi stocks for FBgn0053138 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain238 84 of 4 0.70Down
Head451 224 of 4 1.30Up
Eye276 94 of 4 0.80Down
Thoracicoabdominal ganglion263 74 of 4 0.80Down
Salivary gland498 304 of 4 1.45Up
Crop602 334 of 4 1.70Up
Midgut96 34 of 4 0.30Down
Tubule174 104 of 4 0.50Down
Hindgut359 124 of 4 1.00None
Heart565 334 of 4 1.64Up
Fat body1459 2844 of 4 4.24Up
Ovary440 64 of 4 1.30Up
Testis21 04 of 4 0.10Down
Male accessory glands81 54 of 4 0.20Down
Virgin spermatheca1560 1024 of 4 4.53Up
Mated spermatheca1116 1364 of 4 3.24Up
Adult carcass829 484 of 4 2.40Up
Larval CNS342 444 of 4 0.99None
Larval Salivary gland265 144 of 4 0.77Down
Larval midgut67 24 of 4 0.20Down
Larval tubule101 104 of 4 0.30Down
Larval hindgut183 184 of 4 0.53Down
Larval fat body716 864 of 4 2.10Up
Larval trachea205 94 of 4 0.60Down
Larval carcass990 1154 of 4 2.88Up
S2 cells (growing)217 54 of 4 0.63Down
Whole fly344 174 of 4

Looking for FBgn0053138. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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