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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0053156 through 18771 annotations produced 1 hits



(CG33156):

Annotation Number : CG33156
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0053156
Gbrowse : chr2R:9434647-9439911 (-) // 100.0 //
Probeset : 1636381_a_at
Accessions : protein= NP_001097302; /// NP_788345; /// NP_788346; /// NP_788347; /// NP_788348;, nucleotide= NM_001103832; /// NM_176165; /// NM_176166; /// NM_176167; /// NM_176168;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation
Interpro : 0003951 // NAD+ kinase activity // inferred from electronic annotation /// 0016740 // transferase activity // inferred f
FlyMine data for FBgn0053156.
BDGP gene expression has embryonic in situ data for CG33156: 4 pix of staining in 1 body parts.
BioGrid reports that CG33156 interacts with CG33156 CG6145 CG7313 CG5393 CG6343 .
VDRC has 4 RNAi stocks for FBgn0053156 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 10 of 4 1.90None
Head3 ± 10 of 4 1.80None
Eye1 ± 00 of 4 0.51Down
Thoracicoabdominal ganglion3 ± 00 of 4 1.50Up
Salivary gland16 ± 60 of 4 8.37None
Crop6 ± 20 of 4 3.30None
Midgut2 ± 00 of 4 1.10None
Tubule2 ± 00 of 4 1.20None
Hindgut4 ± 20 of 4 2.30None
Heart4 ± 20 of 4 2.20None
Fat body6 ± 40 of 4 3.38None
Ovary4 ± 10 of 4 2.20None
Testis2 ± 10 of 4 1.20None
Male accessory glands2 ± 00 of 4 1.40None
Virgin spermatheca3 ± 00 of 4 1.99Up
Mated spermatheca4 ± 10 of 4 2.04None
Adult carcass5 ± 20 of 4 2.80None
Larval CNS4 ± 30 of 4 2.08None
Larval Salivary gland5 ± 20 of 4 2.85None
Larval midgut4 ± 10 of 4 2.15None
Larval tubule3 ± 00 of 4 1.60None
Larval hindgut2 ± 00 of 4 1.24None
Larval fat body2 ± 00 of 4 1.30None
Larval trachea3 ± 20 of 4 1.90None
Larval carcass2 ± 00 of 4 1.41None
S2 cells (growing)3 ± 10 of 4 1.92None
Whole fly2 ± 00 of 4

Looking for FBgn0053156. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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