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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0053202 through 18771 annotations produced 1 hits



dpr11 (dpr11):

Annotation Number : CG33202
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0053202
Gbrowse : chr3R:2356020-2419052 (-) // 100.0 //
Probeset : 1630895_at
Accessions : protein= NP_788586;, nucleotide= NM_176409;
FlyMine data for FBgn0053202.
BDGP gene expression has embryonic in situ data for CG33202: 6 pix of staining in 1 body parts.
VDRC has 5 RNAi stocks for FBgn0053202 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain131 ± 24 of 426.00Up
Head23 ± 54 of 4 4.70Up
Eye2 ± 10 of 4 0.48None
Thoracicoabdominal ganglion84 ± 104 of 416.80Up
Salivary gland8 ± 40 of 4 1.65None
Crop5 ± 10 of 4 1.20None
Midgut3 ± 10 of 4 0.60None
Tubule3 ± 00 of 4 0.70Down
Hindgut2 ± 00 of 4 0.60None
Heart0 ± 00 of 4 0.17Down
Fat body8 ± 40 of 4 1.73None
Ovary0 ± 00 of 4 0.10Down
Testis0 ± 00 of 4 0.10Down
Male accessory glands0 ± 00 of 4 0.20Down
Virgin spermatheca8 ± 11 of 4 1.64None
Mated spermatheca5 ± 11 of 4 1.08None
Adult carcass6 ± 10 of 4 1.30None
Larval CNS49 ± 104 of 4 9.76Up
Larval Salivary gland6 ± 10 of 4 1.18None
Larval midgut3 ± 10 of 4 0.64None
Larval tubule2 ± 00 of 4 0.50None
Larval hindgut5 ± 00 of 4 1.06None
Larval fat body2 ± 00 of 4 0.40None
Larval trachea2 ± 10 of 4 0.59None
Larval carcass2 ± 10 of 4 0.47None
S2 cells (growing)2 ± 10 of 4 0.49None
Whole fly5 ± 10 of 4

Looking for FBgn0053202. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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