FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0053208 through 18771 annotations produced 2 hits

mical (Mical):

Annotation Number : CG33208
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0053208
Gbrowse : chr3R:5828032-5867720 (-) // 99.68 //
Probeset : 1623984_s_at
Accessions : protein= NP_001138032; /// NP_788620; /// NP_788621; /// NP_788622; /// NP_788623; /// NP_788624; /// NP_788625; /// NP_788626; /// NP_788627;, nucleotide= NM_001144560; /// NM_176443; /// NM_176444; /// NM_176445; /// NM_176446; /// NM_176447; /// NM_176448; /// NM_176449; /// NM_176450;
Pathway : 0005829 // cytosol // non-traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 00
Interpro : 0003779 // actin binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred f
FlyMine data for FBgn0053208.
BDGP gene expression has embryonic in situ data for MICAL: 8 pix of staining in 5 body parts.
TRiP has 1 RNAi stocks for FBgn0053208 available for purchase.
VDRC has 8 RNAi stocks for FBgn0053208 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	156 ± 2	4 of 4	5.60	Up
Head	61 ± 2	4 of 4	2.20	Up
Eye	48 ± 1	4 of 4	1.73	Up
Thoracicoabdominal ganglion	95 ± 11	4 of 4	3.40	Up
Salivary gland	13 ± 5	0 of 4	0.48	None
Crop	119 ± 5	4 of 4	4.30	Up
Midgut	19 ± 3	1 of 4	0.70	None
Tubule	1 ± 0	0 of 4	0.10	Down
Hindgut	47 ± 2	4 of 4	1.70	Up
Heart	25 ± 3	4 of 4	0.92	None
Fat body	18 ± 5	0 of 4	0.64	Down
Ovary	31 ± 2	4 of 4	1.10	None
Testis	14 ± 1	2 of 4	0.50	Down
Male accessory glands	16 ± 5	0 of 4	0.60	None
Virgin spermatheca	8 ± 1	0 of 4	0.29	Down
Mated spermatheca	3 ± 0	0 of 4	0.11	Down
Adult carcass	69 ± 4	4 of 4	2.50	Up
Larval CNS	83 ± 9	4 of 4	2.97	Up
Larval Salivary gland	20 ± 0	1 of 4	0.73	Down
Larval midgut	20 ± 2	0 of 4	0.72	None
Larval tubule	42 ± 5	3 of 4	1.50	None
Larval hindgut	42 ± 4	4 of 4	1.50	Up
Larval fat body	147 ± 20	4 of 4	5.30	Up
Larval trachea	62 ± 8	4 of 4	2.24	Up
Larval carcass	95 ± 37	4 of 4	3.41	None
S2 cells (growing)	36 ± 3	4 of 4	1.30	None
Whole fly	28 ± 1	4 of 4

mical (Mical):

Annotation Number : CG33208
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0053208
Gbrowse : chr3R:5843964-5867720 (-) // 98.93 //
Probeset : 1636412_at
Accessions : protein= NP_001138032; /// NP_788620; /// NP_788621; /// NP_788622; /// NP_788623; /// NP_788624; /// NP_788625; /// NP_788626; /// NP_788627;, nucleotide= NM_001144560; /// NM_176443; /// NM_176444; /// NM_176445; /// NM_176446; /// NM_176447; /// NM_176448; /// NM_176449; /// NM_176450;
Pathway : 0005829 // cytosol // non-traceable author statement /// 0005886 // plasma membrane // inferred from direct assay /// 00
Interpro : 0003779 // actin binding // inferred from sequence or structural similarity /// 0005515 // protein binding // inferred f
FlyMine data for FBgn0053208.
BDGP gene expression has embryonic in situ data for MICAL: 8 pix of staining in 5 body parts.
TRiP has 1 RNAi stocks for FBgn0053208 available for purchase.
VDRC has 8 RNAi stocks for FBgn0053208 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	6 ± 0	4 of 4	0.10	Down
Head	2 ± 0	0 of 4	0.00	Down
Eye	1 ± 0	0 of 4	0.01	Down
Thoracicoabdominal ganglion	1 ± 0	0 of 4	0.00	Down
Salivary gland	5 ± 1	0 of 4	0.05	Down
Crop	4 ± 1	1 of 4	0.00	Down
Midgut	2 ± 0	0 of 4	0.00	Down
Tubule	4 ± 1	0 of 4	0.00	Down
Hindgut	3 ± 0	0 of 4	0.00	Down
Heart	0 ± 0	0 of 4	0.00	Down
Fat body	7 ± 2	2 of 4	0.07	Down
Ovary	382 ± 13	4 of 4	3.40	Up
Testis	334 ± 7	4 of 4	3.00	Up
Male accessory glands	2 ± 0	0 of 4	0.00	Down
Virgin spermatheca	6 ± 1	2 of 4	0.05	Down
Mated spermatheca	7 ± 1	2 of 4	0.07	Down
Adult carcass	9 ± 2	1 of 4	0.10	Down
Larval CNS	3 ± 2	2 of 4	0.03	Down
Larval Salivary gland	6 ± 0	1 of 4	0.06	Down
Larval midgut	1 ± 1	0 of 4	0.02	Down
Larval tubule	4 ± 0	0 of 4	0.00	Down
Larval hindgut	3 ± 1	0 of 4	0.03	Down
Larval fat body	67 ± 31	4 of 4	0.60	None
Larval trachea	3 ± 1	0 of 4	0.04	Down
Larval carcass	3 ± 0	0 of 4	0.03	Down
S2 cells (growing)	3 ± 0	0 of 4	0.03	Down
Whole fly	112 ± 7	4 of 4

Looking for FBgn0053208. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720