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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0053329 through 18771 annotations produced 1 hits



Serine-peptidase 212 (Sp212):

Annotation Number : CG33329
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0053329
Gbrowse : chr3R:10047849-10049856 (-) // 100.0 //
Probeset : 1626116_at
Accessions : protein= NP_996209;, nucleotide= NM_206487;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity /
FlyMine data for FBgn0053329.
Homophila reports that CG33329 is a close match (3e-11) to human gene PRSS1;TRY1 (NP_002760), a gene associated with Pancreatitis, hereditary, 167800 (3);Trypsinogen deficiency (1).
VDRC has 1 RNAi stocks for FBgn0053329 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain5 00 of 4 0.40Down
Head78 24 of 4 5.10Up
Eye43 54 of 4 2.82Up
Thoracicoabdominal ganglion7 11 of 4 0.50Down
Salivary gland141 104 of 4 9.10Up
Crop118 84 of 4 7.60Up
Midgut2 00 of 4 0.20Down
Tubule6 10 of 4 0.40Down
Hindgut25 14 of 4 1.60Up
Heart41 44 of 4 2.70Up
Fat body64 44 of 4 4.15Up
Ovary3 10 of 4 0.20Down
Testis7 02 of 4 0.50Down
Male accessory glands3 00 of 4 0.20Down
Virgin spermatheca63 44 of 4 4.07Up
Mated spermatheca46 84 of 4 2.97Up
Adult carcass88 34 of 4 5.70Up
Larval CNS5 10 of 4 0.32Down
Larval Salivary gland4 20 of 4 0.29Down
Larval midgut4 20 of 4 0.29Down
Larval tubule6 20 of 4 0.40Down
Larval hindgut41 24 of 4 2.66Up
Larval fat body20 30 of 4 1.30None
Larval trachea43 134 of 4 2.78Up
Larval carcass117 04 of 4 7.60Up
S2 cells (growing)45 34 of 4 2.95Up
Whole fly15 14 of 4

Looking for FBgn0053329. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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