Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0053453 through 18771 annotations produced 1 hits



(CG33453):

Annotation Number : CG33453
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0053453
Gbrowse : chr2R:15140049-15140690 (-) // 100.0 //
Probeset : 1626041_at
Accessions : protein= NP_995888;, nucleotide= NM_206166;
FlyMine data for FBgn0053453.
VDRC has 1 RNAi stocks for FBgn0053453 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 ± 00 of 4 1.30None
Head2 ± 00 of 4 0.70None
Eye2 ± 00 of 4 0.65None
Thoracicoabdominal ganglion3 ± 10 of 4 1.00None
Salivary gland6 ± 30 of 4 1.75None
Crop1 ± 00 of 4 0.40None
Midgut3 ± 11 of 4 1.10None
Tubule3 ± 00 of 4 0.80None
Hindgut4 ± 10 of 4 1.30None
Heart3 ± 00 of 4 0.85None
Fat body7 ± 51 of 4 2.10None
Ovary2 ± 10 of 4 0.70None
Testis5 ± 10 of 4 1.40None
Male accessory glands6 ± 20 of 4 1.70None
Virgin spermatheca6 ± 00 of 4 1.76None
Mated spermatheca4 ± 10 of 4 1.14None
Adult carcass7 ± 21 of 4 1.90None
Larval CNS3 ± 10 of 4 0.89None
Larval Salivary gland4 ± 00 of 4 1.34None
Larval midgut5 ± 11 of 4 1.47None
Larval tubule2 ± 00 of 4 0.80None
Larval hindgut2 ± 00 of 4 0.67None
Larval fat body4 ± 10 of 4 1.10None
Larval trachea2 ± 10 of 4 0.59None
Larval carcass4 ± 00 of 4 1.14None
S2 cells (growing)4 ± 01 of 4 1.33None
Whole fly3 ± 10 of 4

Looking for FBgn0053453. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime