FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0053499 through 18771 annotations produced 1 hits

Sdic:CG32823 /// Sdic:CG33499 /// dynein (Sdic3 /// Sdic4 /// sw):

Annotation Number : CG18000
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0003654 /// FBgn0052823 /// FBgn0053499
Gbrowse : chrX:20099186-20107239 (-) // 100.0 // /// chrX:20075753-20080296 (-) // 81.66 // /// chrX:20091312-20095855 (-) // 81.66 // /// chrUextra:530266-531643 (-) // 48.79 //
Probeset : 1628129_a_at
Accessions : protein= NP_477069; /// NP_477070; /// NP_477071; /// NP_477072; /// NP_477073; /// NP_477074; /// NP_477075; /// NP_477076; /// NP_477077; /// NP_477078; /// NP_477079; /// NP_728323; /// NP_996519; /// NP_996521; /// NP_996522;, nucleotide= NM_057721; /// NM_057722; /// NM_057723; /// NM_057724; /// NM_057725; /// NM_057726; /// NM_057727; /// NM_057728; /// NM_057729; /// NM_057730; /// NM_057731; /// NM_167693; /// NM_206796; /// NM_206798; /// NM_206799;
Pathway : 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotatio
Interpro : 0003774 // motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // non-tracea
FlyMine data for FBgn0003654 /// FBgn0052823 /// FBgn0053499.
Homophila reports that CG18000 is a close match (1e-17) to human gene CILD1;DNAI1;ICS;PCD (NP_036276), a gene associated with Ciliary dyskinesia, primary, 1, 242650 (3);Kartagener syndrome, 244400 (3).
BioGrid reports that CG18000 interacts with CG7229 CG9206 CG9206 CG9206 CG9206 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	770 ± 19	4 of 4	1.80	Up
Head	474 ± 19	4 of 4	1.10	None
Eye	467 ± 2	4 of 4	1.09	None
Thoracicoabdominal ganglion	834 ± 22	4 of 4	1.90	Up
Salivary gland	505 ± 25	4 of 4	1.17	None
Crop	668 ± 18	4 of 4	1.60	Up
Midgut	422 ± 9	4 of 4	1.00	None
Tubule	407 ± 22	4 of 4	0.90	None
Hindgut	659 ± 31	4 of 4	1.50	Up
Heart	384 ± 14	4 of 4	0.89	None
Fat body	447 ± 17	4 of 4	1.04	None
Ovary	375 ± 6	4 of 4	0.90	None
Testis	1596 ± 24	4 of 4	3.70	Up
Male accessory glands	274 ± 9	4 of 4	0.60	Down
Virgin spermatheca	351 ± 13	4 of 4	0.82	None
Mated spermatheca	359 ± 18	4 of 4	0.84	None
Adult carcass	371 ± 28	4 of 4	0.90	None
Larval CNS	546 ± 13	4 of 4	1.27	None
Larval Salivary gland	659 ± 5	4 of 4	1.53	Up
Larval midgut	570 ± 20	4 of 4	1.33	Up
Larval tubule	826 ± 24	4 of 4	1.90	Up
Larval hindgut	1010 ± 25	4 of 4	2.35	Up
Larval fat body	668 ± 89	4 of 4	1.60	None
Larval trachea	951 ± 62	4 of 4	2.21	Up
Larval carcass	815 ± 46	4 of 4	1.90	Up
S2 cells (growing)	360 ± 3	4 of 4	0.84	None
Whole fly	430 ± 42	4 of 4

Looking for FBgn0053499. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720