FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0053503 through 18771 annotations produced 2 hits

Cyp12d1-d (Cyp12d1-d):

Annotation Number : CG18240
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0053503
Gbrowse : chrUextra:247054-248892 (+) // 93.31 // /// chr2R:7011158-7013115 (-) // 100.0 // /// chr2R:7007473-7009349 (-) // 95.28 //
Probeset : 1639069_at
Accessions : protein= NP_995812;, nucleotide= NM_206090;
Pathway : 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // inferred fro
Interpro : "0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred fr
FlyMine data for FBgn0053503.
BDGP gene expression has embryonic in situ data for Cyp12d1-d: 19 pix of staining in 9 body parts.
Homophila reports that CG18240 is a close match (6e-11) to human gene CYP2C8 (NP_000761), a gene associated with Rhabdomyolysis, cerivastatin-induced (3).
VDRC has 3 RNAi stocks for FBgn0053503 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 0	0 of 4	0.30	Down
Head	12 ± 2	3 of 4	1.60	None
Eye	2 ± 1	0 of 4	0.34	Down
Thoracicoabdominal ganglion	5 ± 2	1 of 4	0.70	None
Salivary gland	7 ± 3	0 of 4	0.89	None
Crop	5 ± 0	1 of 4	0.70	Down
Midgut	57 ± 3	4 of 4	7.20	Up
Tubule	67 ± 20	4 of 4	8.50	Up
Hindgut	7 ± 1	2 of 4	0.90	None
Heart	13 ± 6	3 of 4	1.63	None
Fat body	39 ± 12	4 of 4	4.97	Up
Ovary	6 ± 1	2 of 4	0.80	None
Testis	4 ± 1	2 of 4	0.50	Down
Male accessory glands	18 ± 2	3 of 4	2.30	Up
Virgin spermatheca	252 ± 25	4 of 4	31.71	Up
Mated spermatheca	59 ± 5	4 of 4	7.44	Up
Adult carcass	16 ± 1	3 of 4	2.10	Up
Larval CNS	1 ± 1	0 of 4	0.25	Down
Larval Salivary gland	5 ± 1	0 of 4	0.64	None
Larval midgut	33 ± 9	4 of 4	4.18	None
Larval tubule	50 ± 6	4 of 4	6.30	Up
Larval hindgut	8 ± 1	2 of 4	1.08	None
Larval fat body	35 ± 11	4 of 4	4.40	None
Larval trachea	1 ± 1	0 of 4	0.16	Down
Larval carcass	2 ± 0	0 of 4	0.25	Down
S2 cells (growing)	70 ± 1	4 of 4	8.88	Up
Whole fly	8 ± 0	3 of 4

Cyp12d1-d /// Cyp12d1-p (Cyp12d1-d /// Cyp12d1-p):

Annotation Number : CG30489
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0050489 /// FBgn0053503
Gbrowse : chrUextra:247021-248794 (+) // 99.81 // /// chr2R:7007609-7009382 (-) // 100.0 // /// chr2R:7011375-7013148 (-) // 99.81 //
Probeset : 1633401_s_at
Accessions : protein= NP_610635; /// NP_995812;, nucleotide= NM_136791; /// NM_206090;
Pathway : 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005739 // mitochondrion // non-traceabl
Interpro : "0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred fr
FlyMine data for FBgn0050489 /// FBgn0053503.
Homophila reports that CG30489 is a close match (2e-11) to human gene CYP2C8 (NP_000761), a gene associated with Rhabdomyolysis, cerivastatin-induced (3).

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 1	0 of 4	0.10	Down
Head	138 ± 36	4 of 4	2.20	None
Eye	12 ± 1	2 of 4	0.20	Down
Thoracicoabdominal ganglion	6 ± 2	0 of 4	0.10	Down
Salivary gland	12 ± 3	0 of 4	0.20	Down
Crop	8 ± 3	0 of 4	0.10	Down
Midgut	542 ± 37	4 of 4	8.80	Up
Tubule	947 ± 325	4 of 4	15.40	Up
Hindgut	50 ± 7	4 of 4	0.80	None
Heart	101 ± 7	4 of 4	1.64	Up
Fat body	226 ± 18	4 of 4	3.67	Up
Ovary	65 ± 1	4 of 4	1.10	None
Testis	6 ± 1	0 of 4	0.10	Down
Male accessory glands	137 ± 17	4 of 4	2.20	Up
Virgin spermatheca	549 ± 43	4 of 4	8.92	Up
Mated spermatheca	166 ± 34	4 of 4	2.69	None
Adult carcass	220 ± 48	4 of 4	3.60	Up
Larval CNS	0 ± 0	0 of 4	0.01	Down
Larval Salivary gland	13 ± 2	0 of 4	0.21	Down
Larval midgut	170 ± 39	4 of 4	2.77	None
Larval tubule	486 ± 76	4 of 4	7.90	Up
Larval hindgut	47 ± 13	3 of 4	0.77	None
Larval fat body	336 ± 94	4 of 4	5.50	None
Larval trachea	3 ± 4	1 of 4	0.05	Down
Larval carcass	1 ± 0	0 of 4	0.03	Down
S2 cells (growing)	102 ± 3	4 of 4	1.67	Up
Whole fly	61 ± 7	4 of 4

Looking for FBgn0053503. 2 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720