FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0053531 through 18771 annotations produced 4 hits

Discoidin domain receptor (Ddr):

Annotation Number : CG9490
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0053531
Gbrowse : chr2L:6320227-6322135 (+) // 100.0 //
Probeset : 1634372_at
Accessions : protein= NP_001014474; /// NP_001162895;, nucleotide= NM_001014474; /// NM_001169424;
Pathway : 0016021 // integral to membrane // inferred from sequence or structural similarity
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred
FlyMine data for FBgn0053531.
VDRC has 6 RNAi stocks for FBgn0053531 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	45 ± 2	4 of 4	5.60	Up
Head	18 ± 2	1 of 4	2.30	Up
Eye	4 ± 1	0 of 4	0.59	None
Thoracicoabdominal ganglion	31 ± 6	4 of 4	3.80	Up
Salivary gland	19 ± 1	1 of 4	2.34	Up
Crop	11 ± 1	0 of 4	1.40	Up
Midgut	8 ± 3	0 of 4	1.10	None
Tubule	7 ± 1	0 of 4	0.90	None
Hindgut	13 ± 1	0 of 4	1.60	None
Heart	5 ± 0	0 of 4	0.71	None
Fat body	8 ± 0	1 of 4	1.06	None
Ovary	5 ± 1	0 of 4	0.70	None
Testis	7 ± 2	0 of 4	0.90	None
Male accessory glands	7 ± 2	0 of 4	0.90	None
Virgin spermatheca	6 ± 1	0 of 4	0.77	None
Mated spermatheca	5 ± 1	0 of 4	0.70	None
Adult carcass	14 ± 1	0 of 4	1.70	Up
Larval CNS	30 ± 3	4 of 4	3.73	Up
Larval Salivary gland	14 ± 5	1 of 4	1.76	None
Larval midgut	9 ± 3	0 of 4	1.17	None
Larval tubule	6 ± 2	0 of 4	0.80	None
Larval hindgut	9 ± 1	0 of 4	1.14	None
Larval fat body	7 ± 1	0 of 4	0.90	None
Larval trachea	7 ± 1	0 of 4	0.88	None
Larval carcass	10 ± 2	0 of 4	1.25	None
S2 cells (growing)	8 ± 0	1 of 4	1.07	None
Whole fly	8 ± 0	0 of 4

Discoidin domain receptor (Ddr):

Annotation Number : Stencil:2L:6265031:6273206:GENSCAN
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0053531
Gbrowse : chr2L:6272816-6280991 (+) // 100.0 //
Probeset : 1634747_at
Accessions : protein= NP_001014474; /// NP_001162895;, nucleotide= NM_001014474; /// NM_001169424;
Pathway : 0016021 // integral to membrane // inferred from sequence or structural similarity
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred
FlyMine data for FBgn0053531.
VDRC has 6 RNAi stocks for FBgn0053531 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 1	1 of 4	2.70	None
Head	1 ± 0	0 of 4	1.10	None
Eye	3 ± 1	0 of 4	2.80	None
Thoracicoabdominal ganglion	4 ± 1	0 of 4	3.60	None
Salivary gland	2 ± 0	0 of 4	1.67	None
Crop	1 ± 0	0 of 4	1.10	None
Midgut	2 ± 0	0 of 4	1.60	None
Tubule	1 ± 0	0 of 4	1.20	None
Hindgut	2 ± 1	0 of 4	2.10	None
Heart	1 ± 0	0 of 4	1.47	None
Fat body	2 ± 2	0 of 4	2.10	None
Ovary	0 ± 0	0 of 4	0.50	None
Testis	2 ± 0	0 of 4	2.10	None
Male accessory glands	3 ± 0	0 of 4	2.70	Up
Virgin spermatheca	4 ± 1	0 of 4	3.16	None
Mated spermatheca	3 ± 0	0 of 4	2.37	None
Adult carcass	2 ± 0	0 of 4	1.70	None
Larval CNS	3 ± 0	1 of 4	2.57	Up
Larval Salivary gland	1 ± 0	0 of 4	0.90	None
Larval midgut	1 ± 0	0 of 4	1.20	None
Larval tubule	2 ± 1	0 of 4	2.30	None
Larval hindgut	1 ± 0	0 of 4	0.75	None
Larval fat body	7 ± 3	0 of 4	5.90	None
Larval trachea	1 ± 0	0 of 4	1.22	None
Larval carcass	1 ± 0	0 of 4	1.27	None
S2 cells (growing)	1 ± 0	0 of 4	0.86	None
Whole fly	1 ± 0	0 of 4

Discoidin domain receptor (Ddr):

Annotation Number : CG11573
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0053531
Gbrowse : chr2L:6300775-6303347 (+) // 100.0 //
Probeset : 1623389_at
Accessions : protein= NP_001014474; /// NP_001162895;, nucleotide= NM_001014474; /// NM_001169424;
Pathway : 0016021 // integral to membrane // inferred from sequence or structural similarity
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred
FlyMine data for FBgn0053531.
VDRC has 6 RNAi stocks for FBgn0053531 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	16 ± 1	4 of 4	2.60	Up
Head	6 ± 1	1 of 4	1.00	None
Eye	3 ± 0	0 of 4	0.48	None
Thoracicoabdominal ganglion	11 ± 2	2 of 4	1.70	None
Salivary gland	12 ± 2	1 of 4	2.04	None
Crop	3 ± 1	0 of 4	0.60	None
Midgut	12 ± 1	3 of 4	2.00	Up
Tubule	4 ± 0	0 of 4	0.80	Down
Hindgut	3 ± 1	0 of 4	0.50	None
Heart	2 ± 1	0 of 4	0.35	None
Fat body	4 ± 2	1 of 4	0.65	None
Ovary	2 ± 0	0 of 4	0.40	None
Testis	3 ± 0	0 of 4	0.50	None
Male accessory glands	2 ± 0	0 of 4	0.30	None
Virgin spermatheca	8 ± 1	3 of 4	1.35	None
Mated spermatheca	8 ± 2	1 of 4	1.38	None
Adult carcass	8 ± 2	0 of 4	1.30	None
Larval CNS	10 ± 1	4 of 4	1.74	None
Larval Salivary gland	4 ± 1	0 of 4	0.63	None
Larval midgut	12 ± 1	2 of 4	1.96	Up
Larval tubule	4 ± 1	0 of 4	0.60	None
Larval hindgut	4 ± 0	1 of 4	0.73	None
Larval fat body	5 ± 1	0 of 4	0.90	None
Larval trachea	2 ± 2	0 of 4	0.45	None
Larval carcass	6 ± 0	2 of 4	1.01	None
S2 cells (growing)	3 ± 0	1 of 4	0.54	None
Whole fly	6 ± 1	1 of 4

Discoidin domain receptor (Ddr):

Annotation Number : CG9488
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0053531
Gbrowse : chr2L:6289425-6291411 (+) // 100.0 //
Probeset : 1630718_at
Accessions : protein= NP_001014474; /// NP_001162895;, nucleotide= NM_001014474; /// NM_001169424;
Pathway : 0016021 // integral to membrane // inferred from sequence or structural similarity
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred
FlyMine data for FBgn0053531.
VDRC has 6 RNAi stocks for FBgn0053531 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	16 ± 1	4 of 4	2.80	Up
Head	4 ± 1	1 of 4	0.80	None
Eye	2 ± 1	1 of 4	0.52	None
Thoracicoabdominal ganglion	10 ± 1	2 of 4	1.90	None
Salivary gland	11 ± 3	0 of 4	2.01	None
Crop	7 ± 0	0 of 4	1.40	None
Midgut	5 ± 1	0 of 4	1.00	None
Tubule	5 ± 1	0 of 4	1.00	None
Hindgut	5 ± 1	1 of 4	1.00	None
Heart	6 ± 0	0 of 4	1.15	None
Fat body	7 ± 4	1 of 4	1.30	None
Ovary	5 ± 1	0 of 4	1.00	None
Testis	4 ± 0	1 of 4	0.70	None
Male accessory glands	9 ± 1	0 of 4	1.70	None
Virgin spermatheca	4 ± 1	0 of 4	0.83	None
Mated spermatheca	7 ± 2	0 of 4	1.30	None
Adult carcass	6 ± 2	0 of 4	1.20	None
Larval CNS	5 ± 2	1 of 4	1.05	None
Larval Salivary gland	4 ± 0	0 of 4	0.71	None
Larval midgut	6 ± 0	0 of 4	1.05	None
Larval tubule	6 ± 2	1 of 4	1.10	None
Larval hindgut	4 ± 1	0 of 4	0.80	None
Larval fat body	5 ± 1	0 of 4	1.00	None
Larval trachea	4 ± 3	1 of 4	0.81	None
Larval carcass	8 ± 1	0 of 4	1.45	None
S2 cells (growing)	3 ± 0	0 of 4	0.67	None
Whole fly	5 ± 1	1 of 4

Looking for FBgn0053531. 4 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720